RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 CIR1Q86X95 450 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 NOA1Q8NC60 698 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 C2orf15Q8WU43 125 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CYP4F12Q9HCS2 524 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 DNAJB4Q9UDY4 337 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 TELO2Q9Y4R8 837 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 C1orf232A0A0U1RR37 186 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 APOC4-APOC2K7ER74 178 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CLDN11O75508 207 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SUPT7LO94864 414 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 STBD1O95210 358 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 TIMP1P01033 207 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 APOC2P02655 101 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PCNAP12004 261 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 TACR2P21452 398 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PSMB4P28070 264 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 MAPK8P45983 427 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SPIRE1Q08AE8 756 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CSHL1Q14406 222 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SOWAHAQ2M3V2 549 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 LRRC6Q86X45 466 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SUSD3Q96L08 255 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 FAM96AQ9H5X1 160 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 NRDE2Q9H7Z3 1164 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ZFP37Q9Y6Q3 630 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ERI2A8K979 691 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 AP5Z1O43299 807 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 RGS20O76081 388 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 COL6A1P12109 1028 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 FOSL2P15408 326 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 DGKGP49619 791 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SERPINH1P50454 418 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 MPP3Q13368 585 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 BEND6Q5SZJ8 279 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PRR23BQ6ZRT6 265 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ZNF280BQ86YH2 543 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 DIS3LQ8TF46 1054 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 TRMT61BQ9BVS5 477 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ABCG4Q9H172 646 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 EVA1BQ9NVM1 165 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PCDHB9Q9Y5E1 797 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CHD4Q14839 1912 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 INPP4BO15327 924 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 CLASP2O75122 1294 aaKnown RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ATP4AP20648 1035 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 PTPN3P26045 913 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 FMO4P31512 558 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 SOAT1P35610 550 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ARFIP2P53365 341 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 GAD2Q05329 585 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 GALNT3Q14435 633 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 SLC29A2Q14542 456 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ZNF470Q6ECI4 717 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 C12orf50Q8NA57 414 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 VAT1Q99536 393 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 TNKS2Q9H2K2 1166 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ASB8Q9H765 288 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 GRID1Q9ULK0 1009 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 SPACA6W5XKT8 324 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 LAMB4A4D0S4 1761 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ZSCAN5CA6NGD5 496 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 CYP1A2P05177 515 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 APOA4P06727 396 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 NFKB1P19838 968 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 PRKCIP41743 596 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 STX3Q13277 289 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ACBD5Q5T8D3 534 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.111e-8■■■□□ 16
CTNND1-230ENST00000532245 USP6NLQ92738 828 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 LGMNQ99538 433 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 PRDM12Q9H4Q4 367 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 M0R2N6 131 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ACSL4O60488 711 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 TBX18O95935 607 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 GLI1P08151 1106 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ELFN1P0C7U0 828 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 EDNRBP24530 442 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 GPR15P49685 360 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 TRADDQ15628 312 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 HSP90AA5PQ58FG0 334 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 TMCO4Q5TGY1 634 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 TXNDC8Q6A555 127 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 HHIPL1Q96JK4 782 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ATP6V1G3Q96LB4 118 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 HAUS8Q9BT25 410 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ISCUQ9H1K1 167 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 LHX5Q9H2C1 402 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 AGO3Q9H9G7 860 aaKnown RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 PCDH9Q9HC56 1237 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 SOHLH2Q9NX45 425 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 PNMA8BQ9ULN7 279 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-230ENST00000532245 CRYL1Q9Y2S2 319 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 ORC6Q9Y5N6 252 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
CTNND1-230ENST00000532245 LRRC10BA6NIK2 292 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms