RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 GCNT1Q02742 428 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 EIF4EBP2Q13542 120 aaPredicted RBP21.69■■□□□ 1.06
FDFT1-220ENST00000531733 INAVAQ3KP66 663 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 KLHL10Q6JEL2 608 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 SND1Q7KZF4 910 aaKnown RBP eCLIP21.69■■□□□ 1.062e-10■□□□□ 10.8
FDFT1-220ENST00000531733 TMPRSS12Q86WS5 348 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 SPATS2Q86XZ4 545 aaKnown RBP21.69■■□□□ 1.06
FDFT1-220ENST00000531733 DHTKD1Q96HY7 919 aaPredicted RBP21.69■■□□□ 1.06
FDFT1-220ENST00000531733 SERAC1Q96JX3 654 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 PRMT1Q99873 361 aaKnown RBP21.69■■□□□ 1.06
FDFT1-220ENST00000531733 CNTN6Q9UQ52 1028 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 KNTC1P50748 2209 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 ASXL3Q9C0F0 2248 aa21.69■■□□□ 1.06
FDFT1-220ENST00000531733 PSMA7O14818 248 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 TRUB2O95900 331 aaKnown RBP21.68■■□□□ 1.06
FDFT1-220ENST00000531733 IL1BP01584 269 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 ABCB4P21439 1286 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 C5AR1P21730 350 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 EPHA8P29322 1005 aaPredicted RBP21.68■■□□□ 1.06
FDFT1-220ENST00000531733 ACADVLP49748 655 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 IRAK1P51617 712 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.68■■□□□ 1.06
FDFT1-220ENST00000531733 CCDC117Q8IWD4 279 aaPredicted RBP21.68■■□□□ 1.06
FDFT1-220ENST00000531733 OR52K2Q8NGK3 314 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 FRS2Q8WU20 508 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 DCBLD2Q96PD2 775 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 ARHGAP20Q9P2F6 1191 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 SARDHQ9UL12 918 aa21.68■■□□□ 1.06
FDFT1-220ENST00000531733 ARID1BQ8NFD5 2236 aaPredicted RBP21.67■■□□□ 1.06
FDFT1-220ENST00000531733 PPP1R3GB7ZBB8 358 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 TLR4O00206 839 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 CAPN9O14815 690 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 P4HA2O15460 535 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 RTN2O75298 545 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 RFPL3O75679 317 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 MOCS3O95396 460 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 ADH1BP00325 375 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 APOEP02649 317 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 KRT5P13647 590 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 ITPKBP27987 946 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 KCNH2Q12809 1159 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 RNF219Q5W0B1 726 aaPredicted RBP21.67■■□□□ 1.06
FDFT1-220ENST00000531733 CXorf57Q6NSI4 855 aaKnown RBP21.67■■□□□ 1.06
FDFT1-220ENST00000531733 BEND5Q7L4P6 421 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 KANSL1Q7Z3B3 1105 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 TRIM59Q8IWR1 403 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 CCAR2Q8N163 923 aaKnown RBP21.67■■□□□ 1.06
FDFT1-220ENST00000531733 TSC1Q92574 1164 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 BTN2A3PQ96KV6 586 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 INTS2Q9H0H0 1204 aaKnown RBP21.67■■□□□ 1.06
FDFT1-220ENST00000531733 GDF3Q9NR23 364 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 PCDHGA1Q9Y5H4 931 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 MYLKQ15746 1914 aa21.67■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3DA0A087WVF3 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3IA0A087WXS9 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3EA0A087X179 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3KA0A087X1G2 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3FA6NER0 549 aaPredicted RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3LB9A6J9 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 SART1O43290 800 aaKnown RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 LATO43561 262 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TLX3O43711 291 aaPredicted RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 LETM1O95202 739 aaPredicted RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3HP0C7X1 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 MAT2AP31153 395 aaKnown RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 ACADSBP45954 432 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 CENPCQ03188 943 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 SFSWAPQ12872 951 aaKnown RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 POM121L1PQ3SYA9 428 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3GQ6DHY5 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3CQ6IPX1 549 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 GJB7Q6PEY0 223 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TMEM110Q86TL2 294 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 TBC1D3Q8IZP1 549 aaPredicted RBP21.66■■□□□ 1.06
FDFT1-220ENST00000531733 NELFBQ8WX92 580 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 FAM131CQ96AQ9 280 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 CAAP1Q9H8G2 361 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 POPDC2Q9HBU9 364 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 CTNND2Q9UQB3 1225 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 CA5BQ9Y2D0 317 aa21.66■■□□□ 1.06
FDFT1-220ENST00000531733 SYNJ2BP-COX16A0A087WUM0 186 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 KCNU1A8MYU2 1149 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 JUPP14923 745 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 STX17P56962 302 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 YWHAZP63104 245 aaKnown RBP21.65■■□□□ 1.06
FDFT1-220ENST00000531733 TARDBPQ13148 414 aaKnown RBP eCLIP21.65■■□□□ 1.06
FDFT1-220ENST00000531733 STIM1Q13586 685 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 ELAVL3Q14576 367 aaKnown RBP21.65■■□□□ 1.06
FDFT1-220ENST00000531733 HES3Q5TGS1 186 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 SFMBT2Q5VUG0 894 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 PIP4K2CQ8TBX8 421 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 STK32AQ8WU08 396 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 ZNF606Q8WXB4 792 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 SKA1Q96BD8 255 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 ALG14Q96F25 216 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 TIGD1Q96MW7 591 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 UBE2TQ9NPD8 197 aaPredicted RBP21.65■■□□□ 1.06
FDFT1-220ENST00000531733 COX16Q9P0S2 106 aa21.65■■□□□ 1.06
FDFT1-220ENST00000531733 KALRNO60229 2985 aa21.64■■□□□ 1.06
FDFT1-220ENST00000531733 F5H5T6 163 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms