RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OSBPL2Q9H1P3 480 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TMEM30AQ9NV96 361 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 SLC17A6Q9P2U8 582 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 COPG2Q9UBF2 871 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TAGLN3Q9UI15 199 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 DSEQ9UL01 958 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 SCN10AQ9Y5Y9 1956 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ZCWPW2A0A1B0GU75 182 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ZNF623O75123 536 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ENTPD5O75356 428 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TOP3BO95985 862 aaKnown RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 CYP11A1P05108 521 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 MPOP05164 745 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 C6orf222P0C671 652 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 MYL4P12829 197 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 HADHAP40939 763 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 CACNA2D1P54289 1103 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 PRPSAP1Q14558 356 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ANKRD20A4Q4UJ75 823 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TEDDM1Q5T9Z0 273 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 AGMOQ6ZNB7 445 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ZNF669Q96BR6 464 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TEKT5Q96M29 485 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 RILPQ96NA2 401 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 FCRL3Q96P31 734 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 AGAP3Q96P47 875 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 CCDC106Q9BWC9 280 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 C1orf21Q9H246 121 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 MIOSQ9NXC5 875 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ARMCX1Q9P291 453 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 LRRC42Q9Y546 428 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TIMM13Q9Y5L4 95 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TIMM44O43615 452 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 KITP10721 976 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 CD68P34810 354 aaPredicted RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 HTR7P34969 479 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 GCKP35557 465 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 RAP1GDS1P52306 607 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 CSE1LP55060 971 aaKnown RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 DNAL1Q4LDG9 190 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 TIGD5Q53EQ6 642 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 CMPK2Q5EBM0 449 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 NAPEPLDQ6IQ20 393 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 C16orf46Q6P387 395 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 ZCCHC23Q6ZST2 131 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 LINC00523Q86TU6 105 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 KLHDC8BQ8IXV7 354 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 DPF3Q92784 378 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 MYLPFQ96A32 169 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 ZNF395Q9H8N7 513 aaPredicted RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 DMAP1Q9NPF5 467 aaPredicted RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 SNX15Q9NRS6 342 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 NSMCE4AQ9NXX6 385 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 STOML1Q9UBI4 398 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 CACNG4Q9UBN1 327 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 MARCOQ9UEW3 520 aaPredicted RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 LRIG2O94898 1065 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 AOC1P19801 751 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 SCNN1GP51170 649 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 AFF1P51825 1210 aaKnown RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 RPL10AP62906 217 aaKnown RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 MAPRE1Q15691 268 aaKnown RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 GNASQ5JWF2 1037 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 STRA8Q7Z7C7 330 aa17.59■□□□□ 0.41
BRCA2-204ENST00000530893 GEMIN8Q9NWZ8 242 aaKnown RBP17.59■□□□□ 0.41
BRCA2-204ENST00000530893 ARHGAP42A6NI28 874 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 B2RBV5 119 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 SPECC1L-ADORA2AF8WAN1 911 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 KLHL2O95198 593 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 LUC7L3O95232 432 aaKnown RBP17.58■□□□□ 0.4
BRCA2-204ENST00000530893 CHRNA1P02708 482 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 ALOX15P16050 662 aaPredicted RBP17.58■□□□□ 0.4
BRCA2-204ENST00000530893 KCNA4P22459 653 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 IRX4P78413 519 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 CDH17Q12864 832 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 ZBTB17Q13105 803 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 TREML1Q86YW5 311 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 DCLK2Q8N568 766 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 TTC8Q8TAM2 541 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.4
BRCA2-204ENST00000530893 LPPQ93052 612 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 ZNF570Q96NI8 536 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 TSGA13Q96PP4 275 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 RTP3Q9BQQ7 232 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 MLPHQ9BV36 600 aaPredicted RBP17.58■□□□□ 0.4
BRCA2-204ENST00000530893 TMEM216Q9P0N5 145 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 SOX13Q9UN79 622 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 APOBEC2Q9Y235 224 aaKnown RBP17.58■□□□□ 0.4
BRCA2-204ENST00000530893 DNAJC16Q9Y2G8 782 aa17.58■□□□□ 0.4
BRCA2-204ENST00000530893 ARHGEF37A1IGU5 675 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 CASTOR2A6NHX0 329 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 TNPO2O14787 897 aaKnown RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 CACNG3O60359 315 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 IGLV3-25P01717 112 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 AMHP03971 560 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 PRKCGP05129 697 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 NFKB1P19838 968 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 PGM1P36871 562 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 HARS2P49590 506 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms