RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TBC1D3FA6NER0 549 aaPredicted RBP5.08□□□□□ -1.6
C11orf88-204ENST00000529661 B4E171 279 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3LB9A6J9 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 INPPL1O15357 1258 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3HP0C7X1 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 ATP1A3P13637 1013 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 CHN1P15882 459 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 CYP3A7P24462 503 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TSPAN7P41732 249 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 CASP2P42575 452 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 VPS41P49754 854 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 CBFBQ13951 182 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 CBWD5Q5RIA9 395 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 ATG16L1Q676U5 607 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3GQ6DHY5 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3CQ6IPX1 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3Q8IZP1 549 aaPredicted RBP5.08□□□□□ -1.6
C11orf88-204ENST00000529661 FSIP1Q8NA03 581 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 RRP36Q96EU6 259 aaKnown RBP5.08□□□□□ -1.6
C11orf88-204ENST00000529661 ZNF48Q96MX3 618 aaPredicted RBP5.08□□□□□ -1.6
C11orf88-204ENST00000529661 SIGLEC11Q96RL6 698 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 ARHGAP39Q9C0H5 1083 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 RMI1Q9H9A7 625 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 PREBQ9HCU5 417 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TMEM184CQ9NVA4 438 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 MTMR4Q9NYA4 1195 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 SEMA5BQ9P283 1151 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 RAB21Q9UL25 225 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TRPC5Q9UL62 973 aaPredicted RBP5.08□□□□□ -1.6
C11orf88-204ENST00000529661 AGAP5A6NIR3 686 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 RRHO14718 337 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 BMP15O95972 392 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 IGFBP2P18065 325 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 MATN1P21941 496 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 DUSP1P28562 367 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 MAN1A1P33908 653 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 EIF5P55010 431 aaKnown RBP5.07□□□□□ -1.6
C11orf88-204ENST00000529661 KRTAP10-11P60412 298 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 ID2Q02363 134 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 CFHR1Q03591 330 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 BAK1Q16611 211 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 LRRC24Q50LG9 513 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 SLC9C2Q5TAH2 1124 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 WDR78Q5VTH9 848 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 FAAH2Q6GMR7 532 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 PIGOQ8TEQ8 1089 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 RFFLQ8WZ73 363 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 AKAP1Q92667 903 aaKnown RBP eCLIP5.07□□□□□ -1.6
C11orf88-204ENST00000529661 HDAC2Q92769 488 aaKnown RBP5.07□□□□□ -1.6
C11orf88-204ENST00000529661 PPP1R10Q96QC0 940 aaKnown RBP5.07□□□□□ -1.6
C11orf88-204ENST00000529661 HERC2P3Q9BVR0 1158 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 TM2D2Q9BX73 214 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 PAIP1Q9H074 479 aaKnown RBP5.07□□□□□ -1.6
C11orf88-204ENST00000529661 CDCP1Q9H5V8 836 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 ASNSD1Q9NWL6 643 aa5.07□□□□□ -1.6
C11orf88-204ENST00000529661 FBXO9Q9UK97 447 aaPredicted RBP5.07□□□□□ -1.6
C11orf88-204ENST00000529661 SPATA31A1Q5TZJ5 1347 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 C16orf96A6NNT2 1141 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 TTC34A8MYJ7 566 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 KLK10O43240 276 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 PLAUP00749 431 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 FGBP02675 491 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 PEPDP12955 493 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 BDNFP23560 247 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 GRK5P34947 590 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 KRT9P35527 623 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 PNPLA4P41247 253 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 CPA2P48052 419 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 PCP4P48539 62 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 RCAN1P53805 252 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 STIM1Q13586 685 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 RBMS2Q15434 407 aaKnown RBP5.06□□□□□ -1.6
C11orf88-204ENST00000529661 SLC9C1Q4G0N8 1177 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 WDR93Q6P2C0 686 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 KYAT3Q6YP21 454 aaKnown RBP5.06□□□□□ -1.6
C11orf88-204ENST00000529661 TFAP2DQ7Z6R9 452 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 ANKRD13BQ86YJ7 626 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 LINS1Q8NG48 757 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 C16orf52Q8NHV5 167 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 CLEC4CQ8WTT0 213 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 ST8SIA4Q92187 359 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 PIGKQ92643 395 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 ARRDC3Q96B67 414 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 FCRL5Q96RD9 977 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 ELOVL1Q9BW60 279 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 SCNM1Q9BWG6 230 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 AGXT2Q9BYV1 514 aa5.06□□□□□ -1.6
C11orf88-204ENST00000529661 KAT7O95251 611 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 ACP5P13686 325 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 TNNT1P13805 278 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 CPA1P15085 419 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 CAPN3P20807 821 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 NDUFS1P28331 727 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 RPS13P62277 151 aaKnown RBP5.05□□□□□ -1.6
C11orf88-204ENST00000529661 HSF1Q00613 529 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 MTA1Q13330 715 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 GAB1Q13480 694 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
C11orf88-204ENST00000529661 NAA35Q5VZE5 725 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms