RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FAM186BQ8IYM0 893 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 CARNMT1Q8N4J0 409 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 SLC4A11Q8NBS3 891 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 KIAA0895Q8NCT3 520 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 WFDC5Q8TCV5 224 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 KCNE4Q8WWG9 221 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 NDRG1Q92597 394 aaKnown RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 CCDC47Q96A33 483 aaKnown RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 TMEM8AQ9HCN3 771 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 CISHQ9NSE2 258 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 ERVW-1Q9UQF0 538 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 DMTF1Q9Y222 760 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 MAST4O15021 2626 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 GOLGA6L7A0A1B0GV03 622 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 YJEFN3A6XGL0 299 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 B8ZZF3 427 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 E7ENQ6 273 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 WNT9AO14904 365 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 SIGLEC6O43699 453 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 STX10O60499 249 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 C6P13671 934 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 CD19P15391 556 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 NR2F2P24468 414 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 GTF2H1P32780 548 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 PSMC2P35998 433 aaKnown RBP9.31□□□□□ -0.92
VPS11-203ENST00000529545 ME1P48163 572 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 ADPRHP54922 357 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 TBX4P57082 545 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 ERVPABLB-1P60509 514 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 YWHAEP62258 255 aaKnown RBP9.31□□□□□ -0.92
VPS11-203ENST00000529545 GABREP78334 506 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 ECT2LQ008S8 904 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 PPP3CAQ08209 521 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 BST2Q10589 180 aaKnown RBP9.31□□□□□ -0.92
VPS11-203ENST00000529545 PITRM1Q5JRX3 1037 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 C9orf64Q5T6V5 341 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 PCSK4Q6UW60 755 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.31□□□□□ -0.92
VPS11-203ENST00000529545 DSG4Q86SJ6 1040 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 AADATQ8N5Z0 425 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 FAM181AQ8N9Y4 354 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 FBXL13Q8NEE6 735 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 AZIN2Q96A70 460 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 MYO19Q96H55 970 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 INTS4Q96HW7 963 aaKnown RBP9.31□□□□□ -0.92
VPS11-203ENST00000529545 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 DPH1Q9BZG8 443 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 ABCG4Q9H172 646 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 CPNE5Q9HCH3 593 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 CNGB3Q9NQW8 809 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 TSPAN16Q9UKR8 245 aa9.31□□□□□ -0.92
VPS11-203ENST00000529545 TTC34A8MYJ7 566 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 ARHGAP6O43182 974 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 KLK10O43240 276 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 LATO43561 262 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 KLRC4O43908 158 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 SDC3O75056 442 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 USP12O75317 370 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 S1PR4O95977 384 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 MPOP05164 745 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 ALPPL2P10696 532 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 LCP1P13796 627 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 MAT2AP31153 395 aaKnown RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 LSSP48449 732 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 MXI1P50539 228 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 DUSP3P51452 185 aaPredicted RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 NUCB2P80303 420 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 VAC14Q08AM6 782 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 ELAVL3Q14576 367 aaKnown RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 SETMARQ53H47 684 aaPredicted RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 FAM133BQ5BKY9 247 aaKnown RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 FAM46CQ5VWP2 391 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 MSANTD2Q6P1R3 559 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 BHLHA9Q7RTU4 235 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 KANSL1Q7Z3B3 1105 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 SPATS2Q86XZ4 545 aaKnown RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 GRAMD1CQ8IYS0 662 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 KCTD13Q8WZ19 329 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 KLHDC7BQ96G42 594 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 PAGE5Q96GU1 130 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 MRGPRX3Q96LB0 322 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 FAM129BQ96TA1 746 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 POLR1BQ9H9Y6 1135 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 THSD1Q9NS62 852 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 RAB20Q9NX57 234 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 SERTAD1Q9UHV2 236 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 INTS6Q9UL03 887 aaKnown RBP9.3□□□□□ -0.92
VPS11-203ENST00000529545 KIAA1257Q9ULG3 409 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 ITIH6Q6UXX5 1313 aa9.3□□□□□ -0.92
VPS11-203ENST00000529545 COL6A6A6NMZ7 2263 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 PRAMEF26H0Y7S4 382 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 TULP2O00295 520 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms