RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 MFSD1Q9H3U5 465 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 ARHGEF4Q9NR80 690 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 ARHGEF3Q9NR81 526 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CWC15Q9P013 229 aaKnown RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CALCOCO1Q9P1Z2 691 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TRIM10Q9UDY6 481 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CDH22Q9UJ99 828 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 SALL4Q9UJQ4 1053 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 VPS28Q9UK41 221 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FBXO10Q9UK96 956 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TTC7AQ9ULT0 858 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TCF20Q9UGU0 1960 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 KIAA1549LQ6ZVL6 1849 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 A0A0A0MRY4 1105 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GOLGA6CA6NDK9 693 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GOLGA6BA6NDN3 693 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 PGRMC1O00264 195 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ARNTLO00327 626 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 MCF2LO15068 1137 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 TSPAN3O60637 253 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CST8O60676 142 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 TULP3O75386 442 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 KAT7O95251 611 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GOLGA6DP0CG33 693 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 PABPC1P11940 636 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GOT1P17174 413 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ERCC2P18074 760 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CA4P22748 312 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 IL1R2P27930 398 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 SLC6A4P31645 630 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 MAPK8P45983 427 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 RECQLP46063 649 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ARSEP51690 589 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ATXN1P54253 815 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 STARD6P59095 220 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 TAS2R40P59535 323 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 MRPS21P82921 87 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ZXDBP98169 803 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 STARD3Q14849 445 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 TAZQ16635 292 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 INO80DQ53TQ3 878 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 RALGPS1Q5JS13 557 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 DNTTIP2Q5QJE6 756 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 PAPD7Q5XG87 772 aaKnown RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 SLC9A4Q6AI14 798 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 IL31Q6EBC2 164 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CCDC70Q6NSX1 233 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 RFWD3Q6PCD5 774 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 BBS12Q6ZW61 710 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 DSG4Q86SJ6 1040 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CDKL3Q8IVW4 592 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ETFBKMTQ8IXQ9 262 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF683Q8IZ20 524 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 TERB1Q8NA31 727 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CCHCR1Q8TD31 782 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ACTRT1Q8TDG2 376 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GRK7Q8WTQ7 553 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 RNF25Q96BH1 459 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 KCTD15Q96SI1 283 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-211ENST00000528787 PLA2G2FQ9BZM2 168 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CEP44Q9C0F1 390 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 LINC00597Q9H2U6 94 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 SP110Q9HB58 689 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 ATP13A1Q9HD20 1204 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 HPS4Q9NQG7 708 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GOLGA6AQ9NYA3 693 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GTSE1Q9NYZ3 720 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 SUN2Q9UH99 717 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 DNAI1Q9UI46 699 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 GGA2Q9UJY4 613 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 TFR2Q9UP52 801 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 STARD13Q9Y3M8 1113 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 CHD5Q8TDI0 1954 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 MIA3Q5JRA6 1907 aa8.13□□□□□ -1.11
SSBP3-211ENST00000528787 MYOFQ9NZM1 2061 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 hCG_1818297A0A087WSY0 165 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 A0A1W2PQ67 120 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 CCDC188H7C350 402 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 STK25O00506 426 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 KDELR3O43731 214 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 CEP104O60308 925 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 RNASEH1O60930 286 aaKnown RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 ASGR2P07307 311 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 DLDP09622 509 aaKnown RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 KRT10P13645 584 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 ARSAP15289 507 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 CCNCP24863 283 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 STIP1P31948 543 aaKnown RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 RPS24P62847 133 aaKnown RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 ECT2LQ008S8 904 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 IL10RBQ08334 325 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 LONRF2Q1L5Z9 754 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 EOGTQ5NDL2 527 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 TRIM68Q6AZZ1 485 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 TPRG1Q6ZUI0 275 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 CYP4V2Q6ZWL3 525 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 TFAP2DQ7Z6R9 452 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms