RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 HSFX1Q9UBD0 423 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 WDR27A2RRH5 827 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 MTMR11A4FU01 709 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 TRIM49D1C9J1S8 452 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 E9PAM4 449 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 COPEO14579 308 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 FSBPO95073 299 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 GSTA1P08263 222 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 CPB1P15086 417 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 RHOQP17081 205 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 MGAT1P26572 445 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 RFC2P35250 354 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 CCNFP41002 786 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 TUFMP49411 452 aaKnown RBP15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 TUBP50607 506 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 NEK3P51956 506 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 RING1Q06587 406 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 MTM1Q13496 603 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 SLC1A5Q15758 541 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 DBN1Q16643 649 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 MPP5Q8N3R9 675 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 SH3TC2Q8TF17 1288 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 OVCA2Q8WZ82 227 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 CCT6BQ92526 530 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 BTN2A3PQ96KV6 586 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 IL12RB2Q99665 862 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 IL22Q9GZX6 179 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 HIPK3Q9H422 1215 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 KIF9Q9HAQ2 790 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 PLAC1Q9HBJ0 212 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 NEU3Q9UQ49 428 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 BACE2Q9Y5Z0 518 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 HS3ST4Q9Y661 456 aa15.11■□□□□ 0.01
ECHDC1-220ENST00000528402 FAM237BA0A1B0GVD1 139 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 USP1O94782 785 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 JCHAINP01591 159 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 AMHP03971 560 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 DHRS4L1P0CG22 281 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 CCNB1P14635 433 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 FOXN2P32314 431 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 GRIA1P42261 906 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 ALDH7A1P49419 539 aaKnown RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 GEMP55040 296 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 SESN2P58004 480 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 CDH17Q12864 832 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 GRTP1Q5TC63 336 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 RNF43Q68DV7 783 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 SLC39A5Q6ZMH5 540 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 TMEM135Q86UB9 458 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 ARHGAP12Q8IWW6 846 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 UMODL1-AS1Q8N2C9 162 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 ATAD1Q8NBU5 361 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 ZSCAN18Q8TBC5 510 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 ZNF398Q8TD17 642 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 ZNF75CPQ92670 426 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 OXNAD1Q96HP4 312 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 DEFB118Q96PH6 123 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 UBE2OQ9C0C9 1292 aaKnown RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 MLXIPLQ9NP71 852 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 HAUS2Q9NVX0 235 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 GMIPQ9P107 970 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 VANGL2Q9ULK5 521 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 SNX10Q9Y5X0 201 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
ECHDC1-220ENST00000528402 CXorf49A8MYA2 514 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 KLF11O14901 512 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PQBP1O60828 265 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 EDF1O60869 148 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 IL1BP01584 269 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CD68P34810 354 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 NIPAL4Q0D2K0 466 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 IKBKEQ14164 716 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CRYMQ14894 314 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 MGAT5BQ3V5L5 792 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 TRPM8Q7Z2W7 1104 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 TP53INP2Q8IXH6 220 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 DNAAF3Q8N9W5 541 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 RAB3IL1Q8TBN0 382 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SERAC1Q96JX3 654 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 AGAP3Q96P47 875 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CPNE1Q99829 537 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 TTLL2Q9BWV7 592 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ZYG11BQ9C0D3 744 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SLC39A8Q9C0K1 460 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 RNF208Q9H0X6 261 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 OSER1Q9NX31 292 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 NSMCE4AQ9NXX6 385 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 TXNDC16Q9P2K2 825 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PRKAG3Q9UGI9 489 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PHTF1Q9UMS5 762 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 NR2E3Q9Y5X4 410 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 GREB1Q4ZG55 1949 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SHROOM3Q8TF72 1996 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms