RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MDGA1Q8NFP4 955 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 RSPRY1Q96DX4 576 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 TCEAL4Q96EI5 215 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 SLC2A13Q96QE2 648 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 DPH1Q9BZG8 443 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 API5Q9BZZ5 524 aaKnown RBP7.61□□□□□ -1.19
NEDD8-203ENST00000524927 MTG2Q9H4K7 406 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 GOLGA6AQ9NYA3 693 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 ZFP69BQ9UJL9 534 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 PNMA8BQ9ULN7 279 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-203ENST00000524927 NBEAL1Q6ZS30 2694 aa7.61□□□□□ -1.19
NEDD8-203ENST00000524927 ARHGEF37A1IGU5 675 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 TCAF2A6NFQ2 919 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 K7ENP7 123 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 C22orf31O95567 290 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 POMCP01189 267 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 GOLGA8HP0CJ92 632 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 AGXTP21549 392 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 MTNR1BP49286 362 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 SLC5A3P53794 718 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 ITGA1P56199 1179 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 CDK17Q00537 523 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 DSC1Q08554 894 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 PSMD5Q16401 504 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 CYP4A22Q5TCH4 519 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 INO80CQ6PI98 192 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-203ENST00000524927 TCEAL8Q8IYN2 117 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 STPG3Q8N7X2 389 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 ENGASEQ8NFI3 743 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 CCDC26Q8TAB7 109 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 EXOC4Q96A65 974 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 MAP7D2Q96T17 732 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 GORASP1Q9BQQ3 440 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 NACAP1Q9BZK3 213 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 CPVLQ9H3G5 476 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 FAM124BQ9H5Z6 455 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-203ENST00000524927 RSAD1Q9HA92 442 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 FTSJ1Q9UET6 329 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 CROTQ9UKG9 612 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 EVPLQ92817 2033 aa7.6□□□□□ -1.19
NEDD8-203ENST00000524927 MED13LQ71F56 2210 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 ESYT2A0FGR8 921 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 ANO9A1A5B4 782 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 N4BP3O15049 544 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 PRPF3O43395 683 aaKnown RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 PRC1O43663 620 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 RANBP6O60518 1105 aaKnown RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 ALDH1A2O94788 518 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 DCTP40126 519 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 CCR2P41597 374 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 EPHB3P54753 998 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 IL13RA1P78552 427 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 PTH1RQ03431 593 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 GRIK2Q13002 908 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 TARDBPQ13148 414 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 SPIDRQ14159 915 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 TRIM25Q14258 630 aaKnown RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 ALDH1L2Q3SY69 923 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 NXNQ6DKJ4 435 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 CXorf57Q6NSI4 855 aaKnown RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 KCNK18Q7Z418 384 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 MRPL10Q7Z7H8 261 aaKnown RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 IGDCC3Q8IVU1 814 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 DHX40Q8IX18 779 aaKnown RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 METTL13Q8N6R0 699 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 PPM1NQ8N819 430 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 LEMD2Q8NC56 503 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 LNX1Q8TBB1 728 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 KCNE4Q8WWG9 221 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 RLN3Q8WXF3 142 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 TTC14Q96N46 770 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 ZNF578Q96N58 590 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-203ENST00000524927 TTPALQ9BTX7 342 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 LRRCC1Q9C099 1032 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 TM7SF3Q9NS93 570 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 OBP2AQ9NY56 170 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 PRSS50Q9UI38 385 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 ADAM28Q9UKQ2 775 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 TMPRSS11EQ9UL52 423 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 PCDHGA1Q9Y5H4 931 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 HIVEP3Q5T1R4 2406 aa7.59□□□□□ -1.19
NEDD8-203ENST00000524927 HELZP42694 1942 aaKnown RBP7.58□□□□□ -1.2
NEDD8-203ENST00000524927 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
NEDD8-203ENST00000524927 F8W810 466 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 KLK10O43240 276 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 NUAK1O60285 661 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 SEMA7AO75326 666 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 MOSPD3O75425 235 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 IL18BPO95998 194 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 FGFR4P22455 802 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 CCT2P78371 535 aaKnown RBP7.58□□□□□ -1.2
NEDD8-203ENST00000524927 CD83Q01151 205 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 TRAF1Q13077 416 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 ADAM9Q13443 819 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 IGFBP7Q16270 282 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 MUM1Q2TAK8 710 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 WDR72Q3MJ13 1102 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 MIER2Q8N344 545 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 OR14C36Q8NHC7 312 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms