RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 KCNJ12Q14500 433 aa2□□□□□ -2.09
CD44-212ENST00000524922 SLC29A2Q14542 456 aa2□□□□□ -2.09
CD44-212ENST00000524922 INPP5JQ15735 1006 aaPredicted RBP2□□□□□ -2.09
CD44-212ENST00000524922 FAM110CQ1W6H9 321 aa2□□□□□ -2.09
CD44-212ENST00000524922 FAM90A2PQ658T7 463 aa2□□□□□ -2.09
CD44-212ENST00000524922 NUGGCQ68CJ6 796 aa2□□□□□ -2.09
CD44-212ENST00000524922 FAM109BQ6ICB4 259 aaPredicted RBP2□□□□□ -2.09
CD44-212ENST00000524922 CLEC4GQ6UXB4 293 aa2□□□□□ -2.09
CD44-212ENST00000524922 CLEC9AQ6UXN8 241 aa2□□□□□ -2.09
CD44-212ENST00000524922 Q6ZTC4 211 aa2□□□□□ -2.09
CD44-212ENST00000524922 UNC13DQ70J99 1090 aa2□□□□□ -2.09
CD44-212ENST00000524922 FAM57BQ71RH2 274 aa2□□□□□ -2.09
CD44-212ENST00000524922 CNTROBQ8N137 903 aa2□□□□□ -2.09
CD44-212ENST00000524922 MBD3L2Q8NHZ7 208 aaPredicted RBP2□□□□□ -2.09
CD44-212ENST00000524922 ASB5Q8WWX0 329 aa2□□□□□ -2.09
CD44-212ENST00000524922 PIGBQ92521 554 aa2□□□□□ -2.09
CD44-212ENST00000524922 GJA10Q969M2 543 aa2□□□□□ -2.09
CD44-212ENST00000524922 SLC25A28Q96A46 364 aa2□□□□□ -2.09
CD44-212ENST00000524922 ZNF668Q96K58 619 aaPredicted RBP2□□□□□ -2.09
CD44-212ENST00000524922 PIMREGQ9BSJ6 248 aa2□□□□□ -2.09
CD44-212ENST00000524922 SCNM1Q9BWG6 230 aa2□□□□□ -2.09
CD44-212ENST00000524922 STK31Q9BXU1 1019 aa2□□□□□ -2.09
CD44-212ENST00000524922 NUAK2Q9H093 628 aa2□□□□□ -2.09
CD44-212ENST00000524922 MOV10Q9HCE1 1003 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 RXFP3Q9NSD7 469 aa2□□□□□ -2.09
CD44-212ENST00000524922 SACM1LQ9NTJ5 587 aa2□□□□□ -2.09
CD44-212ENST00000524922 ABHD10Q9NUJ1 306 aa2□□□□□ -2.09
CD44-212ENST00000524922 TERF2IPQ9NYB0 399 aa2□□□□□ -2.09
CD44-212ENST00000524922 DDX20Q9UHI6 824 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 NARFQ9UHQ1 456 aa2□□□□□ -2.09
CD44-212ENST00000524922 AGO2Q9UKV8 859 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 MAFFQ9ULX9 164 aa2□□□□□ -2.09
CD44-212ENST00000524922 PROCRQ9UNN8 238 aa2□□□□□ -2.09
CD44-212ENST00000524922 KIAA0100Q14667 2235 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 FER1L6Q2WGJ9 1857 aa2□□□□□ -2.09
CD44-212ENST00000524922 RGPD5Q99666 1765 aa2□□□□□ -2.09
CD44-212ENST00000524922 EVPLQ92817 2033 aa2□□□□□ -2.09
CD44-212ENST00000524922 ANKRD26Q9UPS8 1709 aa2□□□□□ -2.09
CD44-212ENST00000524922 SOS1Q07889 1333 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 SSC5DA1L4H1 1573 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 TMEM272A0A1B0GTI8 110 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 EME2A4GXA9 379 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 AQP7P3A6NL99 342 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 H0YIN7 160 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 DHHO43323 396 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 RASSF9O75901 435 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 WDR47O94967 919 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 IL18RAPO95256 599 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 MT-ND5P03915 603 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 NGFRP08138 427 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 BRAFP15056 766 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 RPS12P25398 132 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 HOXD12P35452 270 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 PBX1P40424 430 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 CDKN2AP42771 156 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 POLD2P49005 469 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 MTHFSP49914 203 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 JAK3P52333 1124 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 EPHB1P54762 984 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 PRMT2P55345 433 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 ZXDBP98169 803 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 DDR1Q08345 913 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 CCDC15Q0P6D6 951 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 ARHGEF6Q15052 776 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 PGM5Q15124 567 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 PFKFB3Q16875 520 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 LRIT3Q3SXY7 679 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 CRY2Q49AN0 593 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 ZNF585BQ52M93 769 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 CC2D1BQ5T0F9 858 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 DAB2IPQ5VWQ8 1189 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 NXNQ6DKJ4 435 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 CXorf57Q6NSI4 855 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 ZNF793Q6ZN11 406 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 RFX8Q6ZV50 586 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 CHST15Q7LFX5 561 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 DCP1BQ8IZD4 617 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 EXD3Q8N9H8 876 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 MASTLQ96GX5 879 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 FAM84BQ96KN1 310 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 HIST1H2AAQ96QV6 131 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 SLCO5A1Q9H2Y9 848 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 MRPL44Q9H9J2 332 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 IL21RQ9HBE5 538 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 USP29Q9HBJ7 922 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 ZCCHC17Q9NP64 241 aaKnown RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 TMOD3Q9NYL9 352 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 TPCN1Q9ULQ1 816 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 COG5Q9UP83 839 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 HPSEQ9Y251 543 aa1.99□□□□□ -2.09
CD44-212ENST00000524922 N4BP2Q86UW6 1770 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 COL1A1P02452 1464 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 COL2A1P02458 1487 aaPredicted RBP1.99□□□□□ -2.09
CD44-212ENST00000524922 FAM205AQ6ZU69 1335 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 MUC6Q6W4X9 2439 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 EPG5Q9HCE0 2579 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 A0A087WYN8 130 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 KIR2DS5A0A0G2JLQ3 304 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 CFAP69A5D8W1 941 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms