RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 LATO43561 262 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 ATP9BO43861 1147 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 MOCS2O96007 188 aaPredicted RBP13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 NOS2P35228 1153 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 CLCN1P35523 988 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 BPIFB4P59827 614 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 SLC6A3Q01959 620 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 KCNJ12Q14500 433 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 ELAVL3Q14576 367 aaKnown RBP13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 KCNT1Q5JUK3 1230 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 FBXL22Q6P050 247 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 NCEH1Q6PIU2 408 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 CHSY1Q86X52 802 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 CACUL1Q86Y37 369 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 MMAAQ8IVH4 418 aaKnown RBP13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 FAM71AQ8IYT1 594 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 C1orf131Q8NDD1 294 aaKnown RBP13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 SNX19Q92543 992 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 PGAP3Q96FM1 320 aaPredicted RBP13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 OMDQ99983 421 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 FEM1AQ9BSK4 669 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 EBF2Q9HAK2 575 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 DKK4Q9UBT3 224 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 SERGEFQ9UGK8 458 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
TOP1MT-217ENST00000523417 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 A0A1W2PR77 199 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 H0Y8X5 98 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 FOXN3O00409 490 aaPredicted RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 ALOX15BO15296 676 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 SLC7A4O43246 635 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 CLDN11O75508 207 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 ERCC5P28715 1186 aaPredicted RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 NUDT1P36639 197 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 SCNN1AP37088 669 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 GRK6P43250 576 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 GABRB2P47870 512 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 CCT8P50990 548 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 AUHQ13825 339 aaKnown RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 ARHGAP44Q17R89 818 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 RNF219Q5W0B1 726 aaPredicted RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 PROSER1Q86XN7 944 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 STK40Q8N2I9 435 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 AADATQ8N5Z0 425 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 PNPLA1Q8N8W4 532 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 RPL10LQ96L21 214 aaKnown RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 C1orf74Q96LT6 269 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 SPAG5Q96R06 1193 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 ACE2Q9BYF1 805 aaPredicted RBP13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 ERVMER34-1Q9H9K5 563 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 DDIT4Q9NX09 232 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 PPM1HQ9ULR3 514 aa13.03□□□□□ -0.32
TOP1MT-217ENST00000523417 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.32
TOP1MT-217ENST00000523417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 A0A1W2PP55 124 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 DRGXA6NNA5 263 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 MCF2LO15068 1137 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 YKT6O15498 198 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 F9P00740 461 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 ATXN1LP0C7T5 689 aaKnown RBP13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 CDK4P11802 303 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 MZF1P28698 734 aaPredicted RBP13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 CD38P28907 300 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 KRT9P35527 623 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 USP8P40818 1118 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 CXCR3P49682 368 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 CDH4P55283 916 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 APBA1Q02410 837 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 SCAPQ12770 1279 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 CAMK4Q16566 473 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 MAN2A1Q16706 1144 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 GANCQ8TET4 914 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 NPY6RQ99463 290 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 NDST4Q9H3R1 872 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 BTBD3Q9Y2F9 522 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 HS3ST4Q9Y661 456 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 FAM208BQ5VWN6 2430 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 AKAP13Q12802 2813 aa13.02□□□□□ -0.33
TOP1MT-217ENST00000523417 KCNK3O14649 394 aa13.01□□□□□ -0.33
TOP1MT-217ENST00000523417 DAB1O75553 588 aa13.01□□□□□ -0.33
TOP1MT-217ENST00000523417 ERBB2P04626 1255 aa13.01□□□□□ -0.33
TOP1MT-217ENST00000523417 WNT1P04628 370 aa13.01□□□□□ -0.33
TOP1MT-217ENST00000523417 C1SP09871 688 aa13.01□□□□□ -0.33
TOP1MT-217ENST00000523417 PDGFRAP16234 1089 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms