RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 DPP6P42658 865 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 GPR85P60893 370 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 KDSRQ06136 332 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 ZNF33AQ06730 810 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 GRIK2Q13002 908 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 DMP1Q13316 513 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 SLC14A1Q13336 389 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 ZNF268Q14587 947 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 NR1I3Q14994 352 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 PPP2R5AQ15172 486 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 CALCRLQ16602 461 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 MLANAQ16655 118 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 PLEKHG6Q3KR16 790 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 SPDYCQ5MJ68 293 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 EMC10Q5UCC4 262 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 SDHAF4Q5VUM1 108 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 PAQR3Q6TCH7 311 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 DSTYKQ6XUX3 929 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 APBB1IPQ7Z5R6 666 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 MON1AQ86VX9 555 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 EXOC4Q96A65 974 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 ERLEC1Q96DZ1 483 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 ZBTB45Q96K62 511 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 CYP2S1Q96SQ9 504 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 LINC00597Q9H2U6 94 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 CALCOCO1Q9P1Z2 691 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 HSFX1Q9UBD0 423 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 PCDHA12Q9UN75 941 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 MAGED2Q9UNF1 606 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 TRAF6Q9Y4K3 522 aa6.79□□□□□ -1.32
VPS13B-211ENST00000522802 MYO18AQ92614 2054 aaKnown RBP6.79□□□□□ -1.32
VPS13B-211ENST00000522802 IGHV1OR15-9A0A0B4J2B8 117 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 ARHGEF35A5YM69 484 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 C2orf78A6NCI8 922 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 K7ERI5 159 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TLX3O43711 291 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 NEMFO60524 1076 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 BAG4O95429 457 aaKnown RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 CYP17A1P05093 508 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 CKMP06732 381 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 HAPLN1P10915 354 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 ODC1P11926 461 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 GABRG2P18507 467 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TYMPP19971 482 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 DDX6P26196 483 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 LRPAP1P30533 357 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TNFSF9P41273 254 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 NPTX2P47972 431 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 SLC6A11P48066 632 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 CLDN6P56747 220 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 EVCP57679 992 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 ZXDBP98169 803 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TAF12Q16514 161 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 CCDC142Q17RM4 750 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 BLOC1S2Q6QNY1 142 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 RABEPKQ7Z6M1 372 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 LRRTM3Q86VH5 581 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 SKAP1Q86WV1 359 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 DAW1Q8N136 415 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 FBXL16Q8N461 479 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TRIML1Q8N9V2 468 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 SH3RF2Q8TEC5 729 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 MRPS31Q92665 395 aaKnown RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TRMT2BQ96GJ1 504 aaKnown RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 IFT74Q96LB3 600 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 YTHDC1Q96MU7 727 aaKnown RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 MTMR9Q96QG7 549 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 DIRC2Q96SL1 478 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 NAP1L4Q99733 375 aaKnown RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 MRPL4Q9BYD3 311 aaKnown RBP6.78□□□□□ -1.32
VPS13B-211ENST00000522802 HAPLN2Q9GZV7 340 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 ZCWPW1Q9H0M4 648 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TMEM60Q9H2L4 133 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 CLMPQ9H6B4 373 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 TMLHEQ9NVH6 421 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 ARHGAP28Q9P2N2 729 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 BTBD3Q9Y2F9 522 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 FLNCQ14315 2725 aa6.78□□□□□ -1.32
VPS13B-211ENST00000522802 STK36Q9NRP7 1315 aa6.77□□□□□ -1.32
VPS13B-211ENST00000522802 MYH11P35749 1972 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 MYO9AB2RTY4 2548 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 CCDC169A6NNP5 214 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 NUDT19A8MXV4 375 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 PLK4O00444 970 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 AQP7O14520 342 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 PLD2O14939 933 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 NFATC1O95644 943 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 NTRK1P04629 796 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 XRCC6P12956 609 aaKnown RBP eCLIP6.77□□□□□ -1.339e-6■■■□□ 15.7
VPS13B-211ENST00000522802 FPR2P25090 351 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 TUFMP49411 452 aaKnown RBP6.77□□□□□ -1.33
VPS13B-211ENST00000522802 PEX3P56589 373 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 MRPS21P82921 87 aaKnown RBP6.77□□□□□ -1.33
VPS13B-211ENST00000522802 BNC1Q01954 994 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 CFHR1Q03591 330 aa6.77□□□□□ -1.33
VPS13B-211ENST00000522802 SRSF1Q07955 248 aaKnown RBP eCLIP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms