RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 MCOLN2Q8IZK6 566 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 NT5C3BQ969T7 300 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 TTC17Q96AE7 1141 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 TOE1Q96GM8 510 aaKnown RBP14.58□□□□□ -0.08
VEGFA-221ENST00000520265 SPON2Q9BUD6 331 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 GPR174Q9BXC1 333 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 RAB6CQ9H0N0 254 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 MIR1-1HGQ9H1L0 117 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 PRSS16Q9NQE7 514 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 TMEM51Q9NW97 253 aa14.58□□□□□ -0.08
VEGFA-221ENST00000520265 GVINP1Q7Z2Y8 2422 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 FAM47DPA6NHR8 397 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 C2CD4BA6NLJ0 364 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 PATE3B3GLJ2 98 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 CCP110O43303 1012 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 GDF9O60383 454 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 FOXD2O60548 495 aaPredicted RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 SRPRAP08240 638 aaKnown RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 ZNF806P0C7X5 589 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 ITPKAP23677 461 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 OR1E1P30953 314 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 PSMD8P48556 350 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 TPMTP51580 245 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 ZNF33AQ06730 810 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 CAMK2GQ13555 558 aaPredicted RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 SYCP2LQ5T4T6 812 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 C6orf118Q5T5N4 469 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 E4F1Q66K89 784 aaPredicted RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 RNF43Q68DV7 783 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 IL31Q6EBC2 164 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 CXorf57Q6NSI4 855 aaKnown RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 PPP1R2P3Q6NXS1 205 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 WDR59Q6PJI9 974 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 STRADAQ7RTN6 431 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 ZNF571Q7Z3V5 609 aaPredicted RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 VPS36Q86VN1 386 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 DRC7Q8IY82 874 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 ZNF653Q96CK0 615 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 LMLNQ96KR4 655 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 HAPLN3Q96S86 360 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 EDEM2Q9BV94 578 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 ZYG11BQ9C0D3 744 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 FBRSQ9HAH7 460 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 CD248Q9HCU0 757 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 MYO1AQ9UBC5 1043 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 SLCO3A1Q9UIG8 710 aa14.57□□□□□ -0.08
VEGFA-221ENST00000520265 MUC22E2RYF6 1773 aaPredicted RBP14.57□□□□□ -0.08
VEGFA-221ENST00000520265 EDDM13A0A1B0GTR0 161 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 SIGLEC16A6NMB1 481 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 I6L893 689 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 CBFA2T2O43439 604 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 SDHBP21912 280 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 TGM1P22735 817 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 PSMA2P25787 234 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 OXTRP30559 389 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 PTPN9P43378 593 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 KRT83P78385 493 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 PUM1Q14671 1186 aaKnown RBP eCLIP14.56□□□□□ -0.084e-7■■■□□ 16.2
VEGFA-221ENST00000520265 HNRNPA1L2Q32P51 320 aaKnown RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 TRIM61Q5EBN2 209 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 EFHC2Q5JST6 749 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 ARCQ7LC44 396 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 DGLUCYQ7Z3D6 616 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 SYT12Q8IV01 421 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 MMAAQ8IVH4 418 aaKnown RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 CCDC185Q8N715 623 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 ATP11CQ8NB49 1132 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 NETO1Q8TDF5 533 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 MRGPRX3Q96LB0 322 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 FEM1AQ9BSK4 669 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 NUSAP1Q9BXS6 441 aaKnown RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 EDEM3Q9BZQ6 932 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 USP36Q9P275 1121 aaKnown RBP14.56□□□□□ -0.08
VEGFA-221ENST00000520265 NCKAP1Q9Y2A7 1128 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 CKAP5Q14008 2032 aa14.56□□□□□ -0.08
VEGFA-221ENST00000520265 CREB3O43889 395 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 IL1BP01584 269 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 FTLP02792 175 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 TPM1P09493 284 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 VAV1P15498 845 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 ADRA1BP35368 520 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 DPP6P42658 865 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 MAPK8P45983 427 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 ATXN3P54252 364 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 HDAC4P56524 1084 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 GSCP56915 257 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 RPS14P62263 151 aaKnown RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 RPL7AP62424 266 aaKnown RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 LINGO4Q6UY18 593 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 STK40Q8N2I9 435 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 OR52K2Q8NGK3 314 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 FOXJ1Q92949 421 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 C1orf74Q96LT6 269 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 OMDQ99983 421 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 C2orf49Q9BVC5 232 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 GTPBP2Q9BX10 602 aaKnown RBP14.55□□□□□ -0.08
VEGFA-221ENST00000520265 TTYH3Q9C0H2 523 aa14.55□□□□□ -0.08
VEGFA-221ENST00000520265 ATP13A1Q9HD20 1204 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms