RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 PAXBP1Q9Y5B6 917 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 MUC22E2RYF6 1773 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 AKAP13Q12802 2813 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 CLDN11O75508 207 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 KRT37O76014 449 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 TOP3BO95985 862 aaKnown RBP26.09■■□□□ 1.77
VEGFA-220ENST00000519767 ADH1BP00325 375 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 PDGFRAP16234 1089 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 SPINK2P20155 84 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 GABRB2P47870 512 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 GALCP54803 685 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 HSP90AA4PQ58FG1 418 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 DBX2Q6ZNG2 339 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 SND1Q7KZF4 910 aaKnown RBP eCLIP26.09■■□□□ 1.774e-9■■□□□ 11.7
VEGFA-220ENST00000519767 ERICH1Q86X53 443 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 PTPRN2Q92932 1015 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 CAMK1GQ96NX5 476 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 NPY6RQ99463 290 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 NAA15Q9BXJ9 866 aaKnown RBP26.09■■□□□ 1.77
VEGFA-220ENST00000519767 STK33Q9BYT3 514 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 NEUROG2Q9H2A3 272 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 WDCPQ9H6R7 721 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 SAMSN1Q9NSI8 373 aaKnown RBP26.09■■□□□ 1.77
VEGFA-220ENST00000519767 TPX2Q9ULW0 747 aaKnown RBP26.09■■□□□ 1.77
VEGFA-220ENST00000519767 STAP1Q9ULZ2 295 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 ANKRD6Q9Y2G4 727 aa26.09■■□□□ 1.77
VEGFA-220ENST00000519767 TMEM8BA6NDV4 472 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 MID1O15344 667 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 PAGE1O75459 146 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 RNASEH2AO75792 299 aaKnown RBP26.08■■□□□ 1.77
VEGFA-220ENST00000519767 PNMA6AP0CW24 399 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-220ENST00000519767 UCHL3P15374 230 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 GOT1P17174 413 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 C5AR1P21730 350 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 MZF1P28698 734 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-220ENST00000519767 CXCR3P49682 368 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 ELAVL3Q14576 367 aaKnown RBP26.08■■□□□ 1.77
VEGFA-220ENST00000519767 KIF19Q2TAC6 998 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 C5orf22Q49AR2 442 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 BRMS1LQ5PSV4 323 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 CXorf57Q6NSI4 855 aaKnown RBP26.08■■□□□ 1.77
VEGFA-220ENST00000519767 SETD7Q8WTS6 366 aaKnown RBP26.08■■□□□ 1.77
VEGFA-220ENST00000519767 IGSF8Q969P0 613 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 NT5C3BQ969T7 300 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 FEM1AQ9BSK4 669 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 IL21RQ9HBE5 538 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 PLCB1Q9NQ66 1216 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 VANGL2Q9ULK5 521 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 HS3ST4Q9Y661 456 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 IGF2RP11717 2491 aa26.08■■□□□ 1.77
VEGFA-220ENST00000519767 NUMA1Q14980 2115 aa26.08■■□□□ 1.76
VEGFA-220ENST00000519767 HYAL3O43820 417 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 LSM8O95777 96 aaKnown RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 RNASE9P60153 205 aaKnown RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 RACK1P63244 317 aaKnown RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 DSG4Q86SJ6 1040 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 GLRX5Q86SX6 157 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 CIR1Q86X95 450 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 STK40Q8N2I9 435 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 KDF1Q8NAX2 398 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 MSANTD4Q8NCY6 345 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 OR2T34Q8NGX1 318 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 ENOX1Q8TC92 643 aaKnown RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 SKA1Q96BD8 255 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 PGAP3Q96FM1 320 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-220ENST00000519767 SIK2Q9H0K1 926 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 PCOLCE2Q9UKZ9 415 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 TBC1D30Q9Y2I9 924 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 MSRB2Q9Y3D2 182 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 FHOD1Q9Y613 1164 aa26.07■■□□□ 1.76
VEGFA-220ENST00000519767 A0A1W2PP55 124 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 FAM221BA6H8Z2 402 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 FAM47DPA6NHR8 397 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 C1QTNF9BB2RNN3 333 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 DFNA5O60443 496 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 CBFA2T3O75081 653 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 IGHV4-34P06331 123 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 C1QTNF9P0C862 333 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 CDH4P55283 916 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 ALG14Q96F25 216 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 C1orf74Q96LT6 269 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 SPAG5Q96R06 1193 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 ARHGEF38Q9NXL2 777 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 SLC25A13Q9UJS0 675 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 APOBEC2Q9Y235 224 aaKnown RBP26.06■■□□□ 1.76
VEGFA-220ENST00000519767 FNDC3AQ9Y2H6 1198 aaKnown RBP26.06■■□□□ 1.76
VEGFA-220ENST00000519767 SNX11Q9Y5W9 270 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 SLCO1B1Q9Y6L6 691 aa26.06■■□□□ 1.76
VEGFA-220ENST00000519767 A0A1W2PPC4 97 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 FLRT2O43155 660 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 IL1BP01584 269 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 PSMD8P48556 350 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 STK19P49842 368 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-220ENST00000519767 CCR5P51681 352 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 SLC25A52Q3SY17 297 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 NCEH1Q6PIU2 408 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 RAB44Q7Z6P3 723 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-220ENST00000519767 ADAT2Q7Z6V5 191 aaKnown RBP26.05■■□□□ 1.76
VEGFA-220ENST00000519767 GATA6Q92908 595 aa26.05■■□□□ 1.76
VEGFA-220ENST00000519767 CDC6Q99741 560 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms