RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 LAYNQ6UX15 382 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 SLC26A9Q7LBE3 791 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 CIR1Q86X95 450 aaPredicted RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 FAM71AQ8IYT1 594 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 STK40Q8N2I9 435 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 AADATQ8N5Z0 425 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 C1orf131Q8NDD1 294 aaKnown RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 ZNF397Q8NF99 534 aaPredicted RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 RHBDD1Q8TEB9 315 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 FRS2Q8WU20 508 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 FAM204AQ9H8W3 233 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 TOR4AQ9NXH8 423 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 COX16Q9P0S2 106 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 PTPRBP23467 1997 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 PLXNA2O75051 1894 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 FAM208BQ5VWN6 2430 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 WDFY3Q8IZQ1 3526 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 A0A1B0GVM2 712 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 A0A1W2PPC4 97 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 TCAF2A6NFQ2 919 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 H0Y8X5 98 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 RNASEH2AO75792 299 aaKnown RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 DKK1O94907 266 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 VAV1P15498 845 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 GOT1P17174 413 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 NOS2P35228 1153 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 KRT9P35527 623 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 VASPP50552 380 aaPredicted RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 IRAK1P51617 712 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 RACK1P63244 317 aaKnown RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 SULT2A1Q06520 285 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 KCNMA1Q12791 1236 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 SUZ12Q15022 739 aaKnown RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 C5orf22Q49AR2 442 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 VWA3BQ502W6 1294 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 RABGAP1LQ5R372 815 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 TTC39BQ5VTQ0 682 aaPredicted RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 OTUD1Q5VV17 481 aaPredicted RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 OR2T34Q8NGX1 318 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 RNF34Q969K3 372 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 NOX5Q96PH1 765 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 OMDQ99983 421 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 FEM1AQ9BSK4 669 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 PLCB1Q9NQ66 1216 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 FZD4Q9ULV1 537 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
CSMD1-205ENST00000519623 CEP83Q9Y592 693 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 OR51B4Q9Y5P0 310 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 HS3ST4Q9Y661 456 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 DOCK9Q9BZ29 2069 aa12.82□□□□□ -0.36
CSMD1-205ENST00000519623 GOLGA4Q13439 2230 aaKnown RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 ANKRD11Q6UB99 2663 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 LRRC72A6NJI9 287 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 I6L893 689 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 TAF4O00268 1085 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 WNT9AO14904 365 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 VILLO15195 856 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 FLRT2O43155 660 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 PCDHGA12O60330 932 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 PAGE1O75459 146 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 DAB1O75553 588 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 WNT1P04628 370 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 C5AR1P21730 350 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 ERCC5P28715 1186 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 NNMTP40261 264 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 PSMD8P48556 350 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 CCR5P51681 352 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 OXCT1P55809 520 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 SNX16P57768 344 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 BPIFB4P59827 614 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 CENPCQ03188 943 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 NME3Q13232 169 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 MTA1Q13330 715 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 TPD52L1Q16890 204 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 DPCR1Q3MIW9 517 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 RNF219Q5W0B1 726 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 CCNI2Q6ZMN8 369 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 SND1Q7KZF4 910 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 ZCCHC14Q8WYQ9 949 aaKnown RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 RPRD1AQ96P16 312 aaPredicted RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 NPY6RQ99463 290 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 CDC6Q99741 560 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 TUBGCP2Q9BSJ2 902 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 ANLNQ9NQW6 1124 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 PIGVQ9NUD9 493 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 RALYQ9UKM9 306 aaKnown RBP12.81□□□□□ -0.36
CSMD1-205ENST00000519623 VANGL2Q9ULK5 521 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D30Q9Y2I9 924 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms