RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 PRDX6P30041 224 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SERPINB5P36952 375 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SCNN1AP37088 669 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SERPINB8P50452 374 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SLC25A52Q3SY17 297 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PPM1LQ5SGD2 360 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PID1Q7Z2X4 250 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 ARHGAP18Q8N392 663 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 OTUD5Q96G74 571 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SNX27Q96L92 541 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PPP1R36Q96LQ0 422 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 RTKNQ9BST9 563 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 IGSF9Q9P2J2 1179 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 RCOR3Q9P2K3 495 aaPredicted RBP16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SSX2IPQ9Y2D8 614 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 INPP5FQ9Y2H2 1132 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PPP2R3BQ9Y5P8 575 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 A0A096LPK6 155 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 ZCWPW2A0A1B0GU75 182 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 CAPN8A6NHC0 703 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 SPTLC1O15269 473 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 CYP2C8P10632 490 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 CCR10P46092 362 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 NUMBP49757 651 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PGGT1BP53609 377 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 XIAPP98170 497 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 IFRD2Q12894 506 aaPredicted RBP16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 ITGA7Q13683 1181 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PDK1Q15118 436 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PDK3Q15120 406 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 GRAMD1BQ3KR37 738 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 DCAF6Q58WW2 860 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 FSCBQ5H9T9 825 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 C9orf57Q5W0N0 161 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 UGT2A3Q6UWM9 527 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 GCNAQ96QF7 691 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 WDR55Q9H6Y2 383 aaPredicted RBP16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 ETAA1Q9NY74 926 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 GPRC5DQ9NZD1 345 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 A0A0G2JLL6 359 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 TXNDC9O14530 226 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 HOXA11P31270 313 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 SPRP35270 261 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 KIZQ2M2Z5 673 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 HSP90AA5PQ58FG0 334 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 OGFRL1Q5TC84 451 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 PRRT2Q7Z6L0 340 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 MFSD3Q96ES6 412 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 GATA5Q9BWX5 397 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 DMAP1Q9NPF5 467 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 TCF7L2Q9NQB0 619 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 ADAM28Q9UKQ2 775 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 GINS2Q9Y248 185 aa16.92■□□□□ 0.3
PCDHGA11-202ENST00000518882 AIM2O14862 343 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 FBXO21O94952 628 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 PABPC4LP0CB38 370 aaKnown RBP16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 MPSTP25325 297 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 NUDT2P50583 147 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 FOLH1Q04609 750 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 TMEM62Q0P6H9 643 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 ADIGQ0VDE8 80 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 ANKRD20A4Q4UJ75 823 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 TMEM135Q86UB9 458 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 CRYBG2Q8N1P7 616 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 LRRC52Q8N7C0 313 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 URGCPQ8TCY9 931 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 KCNK16Q96T55 309 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 LRRC40Q9H9A6 602 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 SCN4AP35499 1836 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 FAM72CH0Y354 149 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 NEMP1O14524 444 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 TRIM13O60858 407 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 AMHP03971 560 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 C2P06681 752 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 PTPN3P26045 913 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 ALDH1A3P47895 512 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 DPYSQ14117 519 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 PAFAH1B3Q15102 231 aaKnown RBP16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 TLR1Q15399 786 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 FAM72AQ5TYM5 149 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 SYPL2Q5VXT5 272 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 FAM72DQ6L9T8 149 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 MAMDC4Q6UXC1 1216 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 SATL1Q86VE3 508 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 FAM72BQ86X60 149 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 KLHL8Q9P2G9 620 aaPredicted RBP16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 VANGL2Q9ULK5 521 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 PCDHGB4Q9UN71 923 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 G3BP2Q9UN86 482 aaKnown RBP16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 PCDHGB5Q9Y5G0 923 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 CSADQ9Y600 493 aa16.91■□□□□ 0.3
PCDHGA11-202ENST00000518882 TMEM114B3SHH9 223 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms