RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TLN1Q9Y490 2541 aaKnown RBP6.36□□□□□ -1.39
PABPC1-207ENST00000518716 PIEZO2Q9H5I5 2752 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 A0A1W2PP55 124 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 C10orf142B7Z368 130 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 WASH3PC4AMC7 463 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 F8VP50 259 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 K7ENM7 598 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 EIF1AYO14602 144 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 BCAT2O15382 392 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 COCHO43405 550 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 TNFSF14O43557 240 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 PCDHGA12O60330 932 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 CER1O95813 267 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 ITGB3P05106 788 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 FAM163BP0C2L3 166 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 ACO1P21399 889 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 GLDCP23378 1020 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 WARSP23381 471 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 ABCD1P33897 745 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 MATKP42679 507 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 WASP42768 502 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 PGFP49763 221 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 TUBP50607 506 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 RBP5P82980 135 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 TAGLNQ01995 201 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 RTP5Q14D33 572 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 MAPRE1Q15691 268 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 KIF19Q2TAC6 998 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 PREPLQ4J6C6 727 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 IL27RAQ6UWB1 636 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 HTR3DQ70Z44 454 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 GGNQ86UU5 652 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 TMPRSS12Q86WS5 348 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 DDX42Q86XP3 938 aaKnown RBP eCLIP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 ZCCHC9Q8N567 271 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 PIP4K2CQ8TBX8 421 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 MYCBPAPQ8TBZ2 947 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 TOE1Q96GM8 510 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 PLIN2Q99541 437 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 SYT15Q9BQS2 421 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 ORAI3Q9BRQ5 295 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 MKRN2Q9H000 416 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 LIN7BQ9HAP6 207 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 EHD2Q9NZN4 543 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 SNX9Q9Y5X1 595 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 DOPEY2Q9Y3R5 2298 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 SPTAN1Q13813 2472 aaKnown RBP6.35□□□□□ -1.39
PABPC1-207ENST00000518716 CKAP5Q14008 2032 aa6.35□□□□□ -1.39
PABPC1-207ENST00000518716 MUC22E2RYF6 1773 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 PTPRJQ12913 1337 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 TEX51A0A1B0GUA7 166 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 A0A1B0GVT2 93 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 J3QKU1 62 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 PLK4O00444 970 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 RNGTTO60942 597 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 CPNE3O75131 537 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 NDUFS2O75306 463 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 MBL2P11226 248 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 NCAM1P13591 858 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 YWHAQP27348 245 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 TPMTP51580 245 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 ZNF132P52740 706 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 PSMC1P62191 440 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 TFAMQ00059 246 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 POSTNQ15063 836 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 FUT11Q495W5 492 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 DCAF12L1Q5VU92 463 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 ARL6IP4Q66PJ3 421 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 PAQR9Q6ZVX9 377 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 GPBP1Q86WP2 473 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 LURAP1LQ8IV03 231 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 CHPFQ8IZ52 775 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 CSGALNACT2Q8N6G5 542 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 OVCA2Q8WZ82 227 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 WBP1Q96G27 269 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 KIF2CQ99661 725 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 GPR174Q9BXC1 333 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 PCED1AQ9H1Q7 454 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 EPB41L4BQ9H329 900 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 CARS2Q9HA77 564 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 GMIPQ9P107 970 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 NOL7Q9UMY1 257 aaKnown RBP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
PABPC1-207ENST00000518716 PCDHGA1Q9Y5H4 931 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 RAD54BQ9Y620 910 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 LRRK2Q5S007 2527 aa6.34□□□□□ -1.39
PABPC1-207ENST00000518716 NBASA2RRP1 2371 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 MYLKQ15746 1914 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 TMEM131Q92545 1883 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 TACC1O75410 805 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 PDGFRBP09619 1106 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 HLA-EP13747 358 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 TYRP14679 529 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 GARTP22102 1010 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 OXTRP30559 389 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 GDNFP39905 211 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 GRK6P43250 576 aa6.33□□□□□ -1.4
PABPC1-207ENST00000518716 CSNK1EP49674 416 aaKnown RBP6.33□□□□□ -1.4
PABPC1-207ENST00000518716 COPAP53621 1224 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms