RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 IL1BP01584 269 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 RHOCP08134 193 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 CDH5P33151 784 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-205ENST00000518060 RDXP35241 583 aaKnown RBP10.89□□□□□ -0.67
SPIDR-205ENST00000518060 SOX5P35711 763 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 STAT1P42224 750 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 NOMO3P69849 1222 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-205ENST00000518060 CDR2Q01850 454 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 UBXN1Q04323 297 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 SULT2A1Q06520 285 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 C9orf64Q5T6V5 341 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 OTUD1Q5VV17 481 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-205ENST00000518060 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 LRRC31Q6UY01 552 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 C14orf80Q86SX3 495 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 STK40Q8N2I9 435 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 AOPEPQ8N6M6 819 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 MYO19Q96H55 970 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 PPP1R9BQ96SB3 815 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 NPY6RQ99463 290 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 C11orf70Q9BRQ4 267 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 SGK2Q9HBY8 427 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-205ENST00000518060 PLXND1Q9Y4D7 1925 aa10.89□□□□□ -0.67
SPIDR-205ENST00000518060 MUC22E2RYF6 1773 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 A0A1B0GVT2 93 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 TARSL2A2RTX5 802 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 EPHB6O15197 1021 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SRGAP2O75044 1071 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 CLDN11O75508 207 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 CER1O95813 267 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 F9P00740 461 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 CEACAM1P13688 526 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 VAV1P15498 845 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SPINK2P20155 84 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 PMLP29590 882 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SLC8A1P32418 973 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 FLT3P36888 993 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SCNN1AP37088 669 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 NSFP46459 744 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 AFF3P51826 1226 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 ATP11AP98196 1134 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 TYRO3Q06418 890 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 EIF4EBP2Q13542 120 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 TEAD4Q15561 434 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 CDO1Q16878 200 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 POM121L1PQ3SYA9 428 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 CXorf57Q6NSI4 855 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 LAYNQ6UX15 382 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 RBM43Q6ZSC3 357 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 TFAP2DQ7Z6R9 452 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 FAM131BQ86XD5 332 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 ZNF677Q86XU0 584 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 EMC1Q8N766 993 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 KDM1BQ8NB78 822 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SLC30A5Q8TAD4 765 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SETD7Q8WTS6 366 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 DNASE2BQ8WZ79 361 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 BIRC7Q96CA5 298 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 CFAP57Q96MR6 1250 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 ZDHHC5Q9C0B5 715 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 NAT10Q9H0A0 1025 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 PCED1AQ9H1Q7 454 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 TMPRSS4Q9NRS4 437 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 ARHGEF38Q9NXL2 777 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SERGEFQ9UGK8 458 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 NOCTQ9UK39 431 aaKnown RBP10.88□□□□□ -0.67
SPIDR-205ENST00000518060 SCML1Q9UN30 329 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 PCDHB9Q9Y5E1 797 aa10.88□□□□□ -0.67
SPIDR-205ENST00000518060 EPG5Q9HCE0 2579 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 TNRC6BQ9UPQ9 1833 aaKnown RBP10.87□□□□□ -0.67
SPIDR-205ENST00000518060 LRRC72A6NJI9 287 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 CNTN5O94779 1100 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 ADH1BP00325 375 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 SDC4P31431 198 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 GABRB2P47870 512 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 CSNK1EP49674 416 aaKnown RBP10.87□□□□□ -0.67
SPIDR-205ENST00000518060 CXCR3P49682 368 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 CDH4P55283 916 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 C21orf59P57076 290 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 KRT83P78385 493 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 SEMA3BQ13214 749 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 ELAVL3Q14576 367 aaKnown RBP10.87□□□□□ -0.67
SPIDR-205ENST00000518060 ALFQ53S48 1182 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 C6orf118Q5T5N4 469 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 KIAA0895LQ68EN5 471 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 NCEH1Q6PIU2 408 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 IL27RAQ6UWB1 636 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 TRIM72Q6ZMU5 477 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 Q6ZVU0 165 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 USP30Q70CQ3 517 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 DSG4Q86SJ6 1040 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 OR14C36Q8NHC7 312 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 OR8D1Q8WZ84 308 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 CAMK1GQ96NX5 476 aa10.87□□□□□ -0.67
SPIDR-205ENST00000518060 FEM1AQ9BSK4 669 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms