RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ADCY4Q8NFM4 1077 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 TEX47Q8TBZ9 253 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FANK1Q8TC84 345 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAPSLQ8WWF8 208 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ANKS1AQ92625 1134 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SYN2Q92777 582 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 DACT3Q96B18 629 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 TXNDC15Q96J42 360 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF512BQ96KM6 892 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF347Q96SE7 839 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTPALQ9BTX7 342 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF717Q9BY31 904 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CADM1Q9BY67 442 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SENP6Q9GZR1 1112 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 MCOLN1Q9GZU1 580 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAVER2Q9HCJ3 691 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 S100A14Q9HCY8 104 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FANCFQ9NPI8 374 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAN1C1Q9NR34 630 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 GIMAP4Q9NUV9 329 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC38A7Q9NVC3 462 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FBXO28Q9NVF7 368 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 GPATCH2Q9NW75 528 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 GDAP2Q9NXN4 497 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 GPRC5DQ9NZD1 345 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 DAPK2Q9UIK4 370 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CNOT11Q9UKZ1 510 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 AP3M1Q9Y2T2 418 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAB39Q9Y376 341 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF175Q9Y473 711 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 IPPQ9Y573 584 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CSNK1G3Q9Y6M4 447 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZHX2Q9Y6X8 837 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 NEDD4P46934 1319 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYO3BQ8WXR4 1341 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYH11P35749 1972 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATP7AQ04656 1500 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 GLI2P10070 1586 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SAMD9LQ8IVG5 1584 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 A0A087WXM4 84 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTC26A0AVF1 554 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMEM120BA0PK00 339 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SH3D21A4FU49 640 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 EFCAB10A6NFE3 127 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 C19orf81C9J6K1 198 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRSS44E7EML9 344 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PI4K2BG5E9Z4 385 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TXNDC9O14530 226 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ARHGEF9O43307 516 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TLR2O60603 784 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TM7SF2O76062 418 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TGDSO95455 350 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 WDPCPO95876 746 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TFRCP02786 760 aaKnown RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 RETP07949 1114 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CD48P09326 243 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SRGAP2CP0DJJ0 459 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACTN1P12814 892 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 NCAM1P13591 858 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRKCAP17252 672 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 IL12AP29459 219 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 HOXC13P31276 330 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 FDFT1P37268 417 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 GP5P40197 560 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 HADHAP40939 763 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAGEA11P43364 429 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 NAMPTP43490 491 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ASMTP46597 345 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ALDH3B2P48448 385 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF135P52742 658 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PLTPP55058 493 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 NCKAP1LP55160 1127 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDK16Q00536 496 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAP1Q01518 475 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAV1Q03135 178 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDC20Q12834 499 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TARDBPQ13148 414 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PPP2R5CQ13362 524 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 APOFQ13790 326 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 KCNJ12Q14500 433 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ALX1Q15699 326 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 LONRF1Q17RB8 773 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLEC16AQ2KHT3 1053 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ABCB5Q2M3G0 1257 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM76BQ5HYJ3 339 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 KCNT1Q5JUK3 1230 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF618Q5T7W0 954 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDCP2Q5VXM1 449 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PGM2L1Q6PCE3 622 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PIK3AP1Q6ZUJ8 805 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 NIPA1Q7RTP0 329 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTC7BQ86TV6 843 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRRTM3Q86VH5 581 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 GATAD2AQ86YP4 633 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms