RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ZNF334Q9HCZ1 680 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 TBC1D22BQ9NU19 505 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 INTS7Q9NVH2 962 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 TRPM5Q9NZQ8 1165 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 MAGEL2Q9UJ55 1249 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 NDRG2Q9UN36 371 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SDK1Q7Z5N4 2213 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SLC12A8A0AV02 714 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 DNAJC6O75061 913 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 HIP1RO75146 1068 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 RPP40O75818 363 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 C1QL1O75973 258 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 NCR1O76036 304 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 RHOBTB1O94844 696 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 RASGRP1O95267 797 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PTPN2P17706 415 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 APOBEC3AP31941 199 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 KIF5BP33176 963 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 FLT3P36888 993 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF81P51508 661 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PTTG1IPP53801 180 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 DSC1Q08554 894 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 ITGB3BPQ13352 177 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PCBP1Q15365 356 aaKnown RBP eCLIP4.05□□□□□ -1.765e-8■■■■■ 41.6
PDLIM5-218ENST00000513341 MAN2A1Q16706 1144 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 IMMTQ16891 758 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PABPC1LQ4VXU2 614 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 LIN9Q5TKA1 542 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 SP5Q6BEB4 398 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 TANGO2Q6ICL3 276 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 ARMC6Q6NXE6 501 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 NIPA1Q7RTP0 329 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 TAS1R1Q7RTX1 841 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 C11orf74Q86VG3 221 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF410Q86VK4 478 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 RALGPS2Q86X27 583 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 TBC1D10CQ8IV04 446 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 CCDC60Q8IWA6 550 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 MFSD6LQ8IWD5 586 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 COLGALT2Q8IYK4 626 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 DEPDC1BQ8WUY9 529 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 NINJ1Q92982 152 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 RRP36Q96EU6 259 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 KXD1Q9BQD3 176 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 APOL6Q9BWW8 343 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 SPZ1Q9BXG8 430 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 CPEB1Q9BZB8 566 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 SLC29A3Q9BZD2 475 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PLA2G2FQ9BZM2 168 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 GPR88Q9GZN0 384 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 LY9Q9HBG7 655 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 AGO4Q9HCK5 861 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 ZFP14Q9HCL3 533 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 TMEM9BQ9NQ34 198 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 MAGEC2Q9UBF1 373 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 NDOR1Q9UHB4 597 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 FBXW11Q9UKB1 542 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PCDHA6Q9UN73 950 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PRKAB1Q9Y478 270 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PCDHB2Q9Y5E7 798 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PCDHA10Q9Y5I2 948 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 PIAS3Q9Y6X2 628 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 SHROOM3Q8TF72 1996 aa4.05□□□□□ -1.76
PDLIM5-218ENST00000513341 TENM4Q6N022 2769 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 NOTCH4Q99466 2003 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 NEDD4P46934 1319 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 MYO18BQ8IUG5 2567 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 WDR81Q562E7 1941 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 IGKV6-21A0A0C4DH24 114 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ERICH2A1L162 156 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 BCLAF3A2AJT9 711 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CGB1A6NKQ9 187 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CDX4O14627 284 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF197O14709 1029 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF263O14978 683 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 NDUFA10O95299 355 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CAVIN2O95810 425 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 TOP3BO95985 862 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CCNE2O96020 404 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CCDC192P0DO97 292 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 NCLP19338 710 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 MX1P20591 662 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ABCG1P45844 678 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 OR1G1P47890 313 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 GNAQP50148 359 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 SLC6A3Q01959 620 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 NCBP1Q09161 790 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 LMAN2Q12907 356 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 SRSF5Q13243 272 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 KARSQ15046 597 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ELF2Q15723 593 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 SLC35G1Q2M3R5 365 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 COL28A1Q2UY09 1125 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 PLK5Q496M5 336 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 EGFLAMQ63HQ2 1017 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 DRICH1Q6PGQ1 229 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 OVCH1Q7RTY7 1134 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 GPRIN1Q7Z2K8 1008 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 KBTBD6Q86V97 674 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 LURAP1LQ8IV03 231 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms