RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ARHGEF28Q8N1W1 1705 aaKnown RBP4.69□□□□□ -1.66
HTT-210ENST00000512909 TRPM1Q7Z4N2 1603 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 COL22A1Q8NFW1 1626 aaPredicted RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 CPDO75976 1380 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 QRICH2Q9H0J4 1663 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 CAMTA1Q9Y6Y1 1673 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 POC1B-GALNT4F8VUJ3 575 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 CLIC1O00299 241 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 NKX2-8O15522 239 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 SH3BP5O60239 455 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 CCNT1O60563 726 aaKnown RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 NUDT3O95989 172 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 TNNT1P13805 278 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 RCAN1P53805 252 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 PRKAA2P54646 552 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 WDR5P61964 334 aaKnown RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 POU5F1BQ06416 359 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 DPTQ07507 201 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 PDCLQ13371 301 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 FAM187BQ17R55 369 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 RUNDC3AQ59EK9 446 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 FBXO47Q5MNV8 452 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 FAM90A2PQ658T7 463 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 DGAT2L7PQ6IED9 249 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 MMS22LQ6ZRQ5 1243 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 GALNT4Q8N4A0 578 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 STT3BQ8TCJ2 826 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 SPPL3Q8TCT6 385 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 GLMPQ8WWB7 406 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 USP13Q92995 863 aaPredicted RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 SENP7Q9BQF6 1050 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 PAAF1Q9BRP4 392 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 ABHD14AQ9BUJ0 271 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 RIC8AQ9NPQ8 531 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 VPS45Q9NRW7 570 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 RXFP3Q9NSD7 469 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 ABHD10Q9NUJ1 306 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 DERAQ9Y315 318 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 CPSF1Q10570 1443 aaKnown RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 EDC4Q6P2E9 1401 aaKnown RBP4.68□□□□□ -1.66
HTT-210ENST00000512909 KIAA1210Q9ULL0 1709 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 SALL3Q9BXA9 1300 aa4.68□□□□□ -1.66
HTT-210ENST00000512909 ANKRD36BQ8N2N9 1353 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 RRN3P2A6NIE6 340 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 MBD3L5A6NJ08 208 aaPredicted RBP4.67□□□□□ -1.66
HTT-210ENST00000512909 TARM1B6A8C7 271 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 H7C1Q1 480 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 TFRCP02786 760 aaKnown RBP4.67□□□□□ -1.66
HTT-210ENST00000512909 TACR3P29371 465 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 GPC5P78333 572 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 RAE1P78406 368 aaKnown RBP4.67□□□□□ -1.66
HTT-210ENST00000512909 TLE3Q04726 772 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 LIN54Q6MZP7 749 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 OLFML1Q6UWY5 402 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 KAT2BQ92831 832 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 CTHRC1Q96CG8 243 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 UBXN10Q96LJ8 280 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
HTT-210ENST00000512909 NUAK2Q9H093 628 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 PDE11AQ9HCR9 933 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 KCND3Q9UK17 655 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 ZBTB1Q9Y2K1 713 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 PCDHA10Q9Y5I2 948 aa4.67□□□□□ -1.66
HTT-210ENST00000512909 COL14A1Q05707 1796 aaKnown RBP4.67□□□□□ -1.66
HTT-210ENST00000512909 CCDC7Q96M83 1385 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 NINLQ9Y2I6 1382 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 GLI3P10071 1580 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 NSD3Q9BZ95 1437 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 TSPAN3O60637 253 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 PRAMEF2O60811 474 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 TK1P04183 234 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 CHRM5P08912 532 aaPredicted RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 IFIT1P09914 478 aaKnown RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 CPA1P15085 419 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 CNTFP26441 200 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 PCSK6P29122 969 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 CDK7P50613 346 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 OAZ1P54368 228 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 RPL15P61313 204 aaKnown RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 TRPC3Q13507 836 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 FAM110CQ1W6H9 321 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 TRIM60Q495X7 471 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 CTXN3Q4LDR2 81 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 TMEM119Q4V9L6 283 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 TTC22Q5TAA0 569 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 CYP26C1Q6V0L0 522 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 GGNQ86UU5 652 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 NPIPB3Q92617 1050 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 EDC3Q96F86 508 aaKnown RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 RBM17Q96I25 401 aaKnown RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 TBATAQ96M53 351 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 TIMP4Q99727 224 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 HTATIP2Q9BUP3 242 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 ELOVL1Q9BW60 279 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 SFXN1Q9H9B4 322 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms