RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SATB2Q9UPW6 733 aa13□□□□□ -0.33
DDX41-215ENST00000512431 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
DDX41-215ENST00000512431 COL6A6A6NMZ7 2263 aa13□□□□□ -0.33
DDX41-215ENST00000512431 YJEFN3A6XGL0 299 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 E7ENQ6 273 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 POLR2DO15514 142 aaKnown RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 PLRG1O43660 514 aaKnown RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 PPP6R2O75170 966 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 RTN2O75298 545 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 THEGLP0DJG4 465 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 DRD3P35462 400 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 CTSOP43234 321 aaPredicted RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 AFMP43652 599 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 NASPP49321 788 aaPredicted RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 RAD23BP54727 409 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 TBX4P57082 545 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 ISXQ2M1V0 245 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 GOLGA7BQ2TAP0 167 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 POM121L1PQ3SYA9 428 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 FAM133BQ5BKY9 247 aaKnown RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 C1orf220Q5T0J3 134 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 INTS8Q75QN2 995 aaKnown RBP12.99□□□□□ -0.33
DDX41-215ENST00000512431 BHLHA9Q7RTU4 235 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 TRIM69Q86WT6 500 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 ARL14Q8N4G2 192 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 LINC00301Q8NCQ3 95 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 PTPRN2Q92932 1015 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 APOLD1Q96LR9 279 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 SPAG5Q96R06 1193 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 DUSP23Q9BVJ7 150 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 CNGB3Q9NQW8 809 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 EXOC1Q9NV70 894 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 NLGN3Q9NZ94 848 aa12.99□□□□□ -0.33
DDX41-215ENST00000512431 C1QTNF3-AMACRE9PGA6 284 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 TULP2O00295 520 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 MAPK13O15264 365 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 CUTAO60888 179 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 LUC7L3O95232 432 aaKnown RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 TRIM49P0CI25 452 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 TRIM49CP0CI26 452 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 LCP1P13796 627 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 ZNF18P17022 549 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 SYT1P21579 422 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 RPS24P62847 133 aaKnown RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 NUCB2P80303 420 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 CUL4BQ13620 913 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 FSCBQ5H9T9 825 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 MSANTD2Q6P1R3 559 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 FOXR1Q6PIV2 292 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 ZNF574Q6ZN55 896 aaPredicted RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 MMS22LQ6ZRQ5 1243 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 IFI44Q8TCB0 444 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 TATDN2Q93075 761 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 PRICKLE1Q96MT3 831 aaPredicted RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 CCNL2Q96S94 520 aaPredicted RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 CALN1Q9BXU9 219 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 UPF2Q9HAU5 1272 aaKnown RBP12.98□□□□□ -0.33
DDX41-215ENST00000512431 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 NCKIPSDQ9NZQ3 722 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 TSPAN16Q9UKR8 245 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 PCDHGA8Q9Y5G5 932 aa12.98□□□□□ -0.33
DDX41-215ENST00000512431 HECTD1Q9ULT8 2610 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 SLC31A1O15431 190 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 PIAS2O75928 621 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 SFTPCP11686 197 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 INHBCP55103 352 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 DAOAP59103 153 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 SULT2A1Q06520 285 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 STK4Q13043 487 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 KRT39Q6A163 491 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 CFAP52Q8N1V2 620 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 SCML4Q8N228 414 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 TPCN2Q8NHX9 752 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 KCTD13Q8WZ19 329 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 ATXN7L3BQ96GX2 97 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 PREBQ9HCU5 417 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 TJP2Q9UDY2 1190 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 CA5BQ9Y2D0 317 aa12.97□□□□□ -0.33
DDX41-215ENST00000512431 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
DDX41-215ENST00000512431 SCAMP1O15126 338 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 LZTS3O60299 673 aaPredicted RBP12.96□□□□□ -0.33
DDX41-215ENST00000512431 GJB6O95452 261 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 SETSIPP0DME0 302 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 MYF5P13349 255 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 CD19P15391 556 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms