RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
RNF4-215ENST00000511843 TTC39BQ5VTQ0 682 aaPredicted RBP13.68□□□□□ -0.22
RNF4-215ENST00000511843 RNF219Q5W0B1 726 aaPredicted RBP13.68□□□□□ -0.22
RNF4-215ENST00000511843 MON1BQ7L1V2 547 aa13.68□□□□□ -0.22
RNF4-215ENST00000511843 BNIPLQ7Z465 357 aa13.68□□□□□ -0.22
RNF4-215ENST00000511843 IRF2BP2Q7Z5L9 587 aa13.68□□□□□ -0.22
RNF4-215ENST00000511843 TFAP2DQ7Z6R9 452 aa13.68□□□□□ -0.22
RNF4-215ENST00000511843 METTL3Q86U44 580 aaKnown RBP13.68□□□□□ -0.22
RNF4-215ENST00000511843 ALG14Q96F25 216 aa13.68□□□□□ -0.22
RNF4-215ENST00000511843 C2CD4BA6NLJ0 364 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 MEI4A8MW99 385 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 E9PAM4 449 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 FOXD2O60548 495 aaPredicted RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 SRPRAP08240 638 aaKnown RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 FERP16591 822 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 SDHBP21912 280 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 ACSL1P33121 698 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 RFC1P35251 1148 aaPredicted RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 MAPK8P45983 427 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 SPDYCQ5MJ68 293 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 C9orf64Q5T6V5 341 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 ZNF776Q68DI1 518 aaPredicted RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 ERMP1Q7Z2K6 904 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 PHF13Q86YI8 300 aaPredicted RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 RGL4Q8IZJ4 473 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 STK40Q8N2I9 435 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 OR2I1PQ8NGU4 316 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 ZNF419Q96HQ0 510 aaPredicted RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 FEM1AQ9BSK4 669 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 SYT11Q9BT88 431 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 SELENOOQ9BVL4 669 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 MUC3BQ9H195 1237 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 RSPH9Q9H1X1 276 aaPredicted RBP13.67□□□□□ -0.22
RNF4-215ENST00000511843 SERGEFQ9UGK8 458 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 SUN2Q9UH99 717 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 VPS28Q9UK41 221 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 CACNA1AO00555 2505 aa13.67□□□□□ -0.22
RNF4-215ENST00000511843 ITIH6Q6UXX5 1313 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 CDX4O14627 284 aaPredicted RBP13.66□□□□□ -0.22
RNF4-215ENST00000511843 MID1O15344 667 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
RNF4-215ENST00000511843 SNAP91O60641 907 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 CLDN11O75508 207 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 IGLV3-19P01714 112 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 DNTTP04053 509 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 CALB1P05937 261 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 RHOCP08134 193 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 KRT3P12035 628 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 ENGP17813 658 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 SDC4P31431 198 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 PSMD8P48556 350 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 PLK1P53350 603 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 METAP1P53582 386 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 LIMK1P53667 647 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 CDH4P55283 916 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 FANCCQ00597 558 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 ASIC2Q16515 512 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 UAP1L1Q3KQV9 507 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 C5orf22Q49AR2 442 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 DCAF12L1Q5VU92 463 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 PEAR1Q5VY43 1037 aaPredicted RBP13.66□□□□□ -0.22
RNF4-215ENST00000511843 IL31Q6EBC2 164 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 ARCQ7LC44 396 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 MMAAQ8IVH4 418 aaKnown RBP13.66□□□□□ -0.22
RNF4-215ENST00000511843 CCDC185Q8N715 623 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 GANCQ8TET4 914 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 SNX19Q92543 992 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 PTPRN2Q92932 1015 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 PSMB7Q99436 277 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 NUSAP1Q9BXS6 441 aaKnown RBP13.66□□□□□ -0.22
RNF4-215ENST00000511843 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 C6orf106Q9H6K1 298 aaPredicted RBP13.66□□□□□ -0.22
RNF4-215ENST00000511843 PAXBP1Q9Y5B6 917 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 SLCO1B1Q9Y6L6 691 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 SPTBN2O15020 2390 aa13.66□□□□□ -0.22
RNF4-215ENST00000511843 A0A0D9SEW6 157 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 EDDM13A0A1B0GTR0 161 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 A0A1W2PQC6 194 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 TCRBV5S1A1TA0A578 114 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 DRGXA6NNA5 263 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 PLK4O00444 970 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 CCP110O43303 1012 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 ENDOD1O94919 500 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 SKILP12757 684 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 GPD1P21695 349 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 GLDCP23378 1020 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 RRM1P23921 792 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 OXTRP30559 389 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 HDAC4P56524 1084 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
RNF4-215ENST00000511843 NR1I3Q14994 352 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 CST6Q15828 149 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 DUOXA1Q1HG43 343 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms