RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-215ENST00000511642 ZNF560Q96MR9 790 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 HNRNPABQ99729 332 aaKnown RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 MCMBPQ9BTE3 642 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 DICER1Q9UPY3 1922 aaKnown RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 SBF1O95248 1867 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 EEF2KO00418 725 aaKnown RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 CD4P01730 458 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 FYNP06241 537 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 LYNP07948 512 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 DARSP14868 501 aaKnown RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 ABCG1P45844 678 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 SERPINB8P50452 374 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 IRF9Q00978 393 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 USP4Q13107 963 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 SEMA3BQ13214 749 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 HNRNPDQ14103 355 aaKnown RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 FRG1Q14331 258 aaKnown RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 XKR4Q5GH76 650 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 KCTD11Q693B1 232 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 FSTL4Q6MZW2 842 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 EPGNQ6UW88 154 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 PID1Q7Z2X4 250 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 STRA8Q7Z7C7 330 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 DHDDSQ86SQ9 333 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
CCND3-215ENST00000511642 MAPK15Q8TD08 544 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 CDH19Q9H159 772 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 LRRC40Q9H9A6 602 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 CASS4Q9NQ75 786 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 TXNDC16Q9P2K2 825 aa14.09□□□□□ -0.15
CCND3-215ENST00000511642 CD68P34810 354 aaPredicted RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 NUMBP49757 651 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 TAF6P49848 677 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 CDK7P50613 346 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 EPHB1P54762 984 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 NME3Q13232 169 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 SLC9B1Q4ZJI4 515 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCND3-215ENST00000511642 ACVR1CQ8NER5 493 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 TMEM40Q8WWA1 233 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 WNT8BQ93098 351 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 AGAP3Q96P47 875 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 TSC22D3Q99576 134 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 MLPHQ9BV36 600 aaPredicted RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 COG4Q9H9E3 785 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 CAB39LQ9H9S4 337 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 ZDHHC7Q9NXF8 308 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 KLHL8Q9P2G9 620 aaPredicted RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 ADAMTS6Q9UKP5 1117 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 SMIM24O75264 130 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 KCNE1P15382 129 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 CD1EP15812 388 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 NPR3P17342 541 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 ERCC2P18074 760 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 WARSP23381 471 aaKnown RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 YY1P25490 414 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 SPRP35270 261 aaPredicted RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 ANKRD20A4Q4UJ75 823 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 UBXN11Q5T124 520 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 THEMIS2Q5TEJ8 643 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 CLEC20AQ6ZU45 233 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 NPWQ8N729 165 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 KCTD13Q8WZ19 329 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 CMTM5Q96DZ9 223 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 TNIP3Q96KP6 325 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 TUBGCP5Q96RT8 1024 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 DDX50Q9BQ39 737 aaKnown RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 FERMT1Q9BQL6 677 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 CYP4F11Q9HBI6 524 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 WDR6Q9NNW5 1121 aaKnown RBP14.08□□□□□ -0.16
CCND3-215ENST00000511642 VANGL2Q9ULK5 521 aa14.08□□□□□ -0.16
CCND3-215ENST00000511642 PLXNB2O15031 1838 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 NRCAMQ92823 1304 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 A0A096LPK6 155 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 NRP1O14786 923 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 DCXO43602 365 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 ZMPSTE24O75844 475 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 GNAT1P11488 350 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 NCF2P19878 526 aaPredicted RBP14.07□□□□□ -0.16
CCND3-215ENST00000511642 IGFBP6P24592 240 aaPredicted RBP14.07□□□□□ -0.16
CCND3-215ENST00000511642 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
CCND3-215ENST00000511642 PNPLA4P41247 253 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 CSRP3P50461 194 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 MSLNQ13421 630 aaPredicted RBP14.07□□□□□ -0.16
CCND3-215ENST00000511642 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
CCND3-215ENST00000511642 DUSP28Q4G0W2 176 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 KIAA0319Q5VV43 1072 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 EP400NLQ6ZTU2 488 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 EFCAB3Q8N7B9 438 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 GPRC5AQ8NFJ5 357 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 SLC7A14Q8TBB6 771 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 CCDC124Q96CT7 223 aaKnown RBP14.07□□□□□ -0.16
CCND3-215ENST00000511642 MFSD3Q96ES6 412 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 TRAPPC9Q96Q05 1148 aa14.07□□□□□ -0.16
CCND3-215ENST00000511642 EBF3Q9H4W6 596 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms