RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SCFD2Q8WU76 684 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 ATP6V0A1Q93050 837 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 HDAC10Q969S8 669 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 DYNLL2Q96FJ2 89 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 TMX3Q96JJ7 454 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 DMRTA2Q96SC8 542 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 FZD8Q9H461 694 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 WDR6Q9NNW5 1121 aaKnown RBP6.13□□□□□ -1.43
GYPB-212ENST00000511198 DKK4Q9UBT3 224 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 MTO1Q9Y2Z2 717 aaKnown RBP6.13□□□□□ -1.43
GYPB-212ENST00000511198 LOXHD1Q8IVV2 1947 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 NCAM2O15394 837 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 SGTAO43765 313 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 CAND2O75155 1236 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 KATNA1O75449 491 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 HAUS5O94927 633 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 CXCL14O95715 111 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 NDUFB10O96000 172 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 CYP2D6P10635 497 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 KRT10P13645 584 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 FBLP22087 321 aaKnown RBP6.12□□□□□ -1.43
GYPB-212ENST00000511198 PBX3P40426 434 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 ABCG1P45844 678 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 CXCL12P48061 93 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 TSC2P49815 1807 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 CCR3P51677 355 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 SLC16A1P53985 500 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 IL10RAQ13651 578 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 LY6DQ14210 128 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 SMC1AQ14683 1233 aaKnown RBP6.12□□□□□ -1.43
GYPB-212ENST00000511198 FNDC1Q4ZHG4 1894 aaPredicted RBP6.12□□□□□ -1.43
GYPB-212ENST00000511198 PARM1Q6UWI2 310 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 Q6ZNX1 250 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 ADGRG3Q86Y34 549 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 FMNL3Q8IVF7 1028 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 MIGA1Q8NAN2 632 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 SIMC1Q8NDZ2 872 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 IL17RDQ8NFM7 739 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 SLC9A6Q92581 669 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 FGF14Q92915 247 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 MRGPRX4Q96LA9 322 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 TEKT5Q96M29 485 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 MED15Q96RN5 788 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 TBCCD1Q9NVR7 557 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 C2orf42Q9NWW7 574 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 VSX1Q9NZR4 365 aaPredicted RBP6.12□□□□□ -1.43
GYPB-212ENST00000511198 ZMYM2Q9UBW7 1377 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 MYO5AQ9Y4I1 1855 aaKnown RBP6.12□□□□□ -1.43
GYPB-212ENST00000511198 PCDHB1Q9Y5F3 818 aa6.12□□□□□ -1.43
GYPB-212ENST00000511198 SPAG17Q6Q759 2223 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 XPOTO43592 962 aaKnown RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 CIAO1O76071 339 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 GH1P01241 217 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 CXCR5P32302 372 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 KLRC3Q07444 240 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 MGAT3Q09327 533 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 BAATQ14032 418 aaPredicted RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 ZNF169Q14929 603 aaPredicted RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 GEN1Q17RS7 908 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TWISTNBQ3B726 338 aaPredicted RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 FLYWCH1Q4VC44 716 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 PABPC1LQ4VXU2 614 aaKnown RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 FAM102BQ5T8I3 360 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 C15orf39Q6ZRI6 1047 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TPRG1Q6ZUI0 275 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 CACNA2D4Q7Z3S7 1137 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 PIP4P1Q86T03 277 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 RSPH3Q86UC2 560 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 GLG1Q92896 1179 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TSR2Q969E8 191 aaKnown RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 KATNAL1Q9BW62 490 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TLR10Q9BXR5 811 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TRIM4Q9C037 500 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 SFXN1Q9H9B4 322 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TMEM9BQ9NQ34 198 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.11□□□□□ -1.43
GYPB-212ENST00000511198 PCDHGA5Q9Y5G8 931 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 ATG2BQ96BY7 2078 aa6.11□□□□□ -1.43
GYPB-212ENST00000511198 TLN1Q9Y490 2541 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 CELSR2Q9HCU4 2923 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 PDZD2O15018 2839 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 CLUHO75153 1309 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 C17orf102A2RUQ5 167 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 CCDC154A6NI56 674 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 ERN1O75460 977 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 AGFG2O95081 481 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 STAG3L1P0CL83 205 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 PTH2RP49190 550 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 SNAP25P60880 206 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 MVPQ14764 893 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 ODF1Q14990 250 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 FBXO47Q5MNV8 452 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 UTP14CQ5TAP6 766 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 LNX2Q8N448 690 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 FAM98AQ8NCA5 519 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 PTCD3Q96EY7 689 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 ZNF764Q96H86 408 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms