RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 CCDC117Q8IWD4 279 aaPredicted RBP12.42□□□□□ -0.42
CHFR-208ENST00000511001 DHX40Q8IX18 779 aaKnown RBP12.42□□□□□ -0.42
CHFR-208ENST00000511001 MINDY1Q8N5J2 469 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 CPA5Q8WXQ8 436 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 RNF34Q969K3 372 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 RPL10LQ96L21 214 aaKnown RBP12.42□□□□□ -0.42
CHFR-208ENST00000511001 TBCBQ99426 244 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 GTPBP2Q9BX10 602 aaKnown RBP12.42□□□□□ -0.42
CHFR-208ENST00000511001 C6orf106Q9H6K1 298 aaPredicted RBP12.42□□□□□ -0.42
CHFR-208ENST00000511001 NLRC4Q9NPP4 1024 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
CHFR-208ENST00000511001 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 SUSD2Q9UGT4 822 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 TMEM59LQ9UK28 342 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 OR51B4Q9Y5P0 310 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 SLCO1B1Q9Y6L6 691 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 ATRXP46100 2492 aa12.42□□□□□ -0.42
CHFR-208ENST00000511001 A0A1B0GTW7 788 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 TARSL2A2RTX5 802 aaKnown RBP12.41□□□□□ -0.42
CHFR-208ENST00000511001 LRRC10BA6NIK2 292 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 C10orf142B7Z368 130 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 GOLGA8SH3BPF8 625 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 MOCS3O95396 460 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 MBD3O95983 291 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 DNTTP04053 509 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 ST8SIA6P61647 398 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 CDR2Q01850 454 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 BNC1Q01954 994 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 SEMA3BQ13214 749 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 SYCP1Q15431 976 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 BRMS1LQ5PSV4 323 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 FKBP15Q5T1M5 1219 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 PIP4P1Q86T03 277 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 ZCCHC9Q8N567 271 aaKnown RBP12.41□□□□□ -0.42
CHFR-208ENST00000511001 DEFB124Q8NES8 71 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 RPRD1AQ96P16 312 aaPredicted RBP12.41□□□□□ -0.42
CHFR-208ENST00000511001 PCDHB18PQ96TA0 734 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 TKTL2Q9H0I9 626 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 SIK2Q9H0K1 926 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 PCED1AQ9H1Q7 454 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 PABPC3Q9H361 631 aaKnown RBP12.41□□□□□ -0.42
CHFR-208ENST00000511001 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 SERGEFQ9UGK8 458 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 EIF2B4Q9UI10 523 aaKnown RBP12.41□□□□□ -0.42
CHFR-208ENST00000511001 STAP1Q9ULZ2 295 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 DAAM1Q9Y4D1 1078 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 FRYQ5TBA9 3013 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 CEP295Q9C0D2 2601 aa12.41□□□□□ -0.42
CHFR-208ENST00000511001 EDDM13A0A1B0GTR0 161 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 UPK3BL1B0FP48 263 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 UPK3BL2E5RIL1 263 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 MID1O15344 667 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 CNTN5O94779 1100 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 SEMA4FO95754 770 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 SYPP08247 313 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 UNGP13051 313 aaPredicted RBP12.4□□□□□ -0.42
CHFR-208ENST00000511001 CEACAM1P13688 526 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 CD59P13987 128 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 VAV1P15498 845 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 GNSP15586 552 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 MMP8P22894 467 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 DEKP35659 375 aaKnown RBP12.4□□□□□ -0.42
CHFR-208ENST00000511001 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
CHFR-208ENST00000511001 DEUP1Q05D60 604 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 TYRO3Q06418 890 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 PTP4A2Q12974 167 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 GRIK2Q13002 908 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 MTA1Q13330 715 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 SLC25A52Q3SY17 297 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 TTC31Q49AM3 519 aaPredicted RBP12.4□□□□□ -0.42
CHFR-208ENST00000511001 RAB6CQ53S08 254 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 ALFQ53S48 1182 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 ARCQ7LC44 396 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 STK40Q8N2I9 435 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 FRS2Q8WU20 508 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 ERGIC2Q96RQ1 377 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 ORAI3Q9BRQ5 295 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 BTBD1Q9H0C5 482 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 RAB6CQ9H0N0 254 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 WDCPQ9H6R7 721 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 METTL5Q9NRN9 209 aaKnown RBP12.4□□□□□ -0.42
CHFR-208ENST00000511001 DNAAF2Q9NVR5 837 aaKnown RBP12.4□□□□□ -0.42
CHFR-208ENST00000511001 ANGPTL2Q9UKU9 493 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 TBC1D30Q9Y2I9 924 aa12.4□□□□□ -0.42
CHFR-208ENST00000511001 IGLV3-10A0A075B6K4 115 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 DRGXA6NNA5 263 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
CHFR-208ENST00000511001 OPHN1O60890 802 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 CLDN11O75508 207 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 ENDOD1O94919 500 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 F9P00740 461 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 TPM2P07951 284 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 ATP1A3P13637 1013 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 STAT1P42224 750 aa12.39□□□□□ -0.43
CHFR-208ENST00000511001 ATXN3P54252 364 aaPredicted RBP12.39□□□□□ -0.43
CHFR-208ENST00000511001 CDH4P55283 916 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms