RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ADAT2Q7Z6V5 191 aaKnown RBP16.44■□□□□ 0.22
RAB40C-202ENST00000509637 TMEM110Q86TL2 294 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 GALNT15Q8N3T1 639 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 OR14C36Q8NHC7 312 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 SMARCE1Q969G3 411 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 FAM149B1Q96BN6 582 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 CEP63Q96MT8 703 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 SERPINB11Q96P15 392 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 MED15Q96RN5 788 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 ACE2Q9BYF1 805 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-202ENST00000509637 ANLNQ9NQW6 1124 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 FTSJ1Q9UET6 329 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 FZD4Q9ULV1 537 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 SCML1Q9UN30 329 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 OR51B4Q9Y5P0 310 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 RAI2Q9Y5P3 530 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 SHROOM3Q8TF72 1996 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 SMG1Q96Q15 3661 aaKnown RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 EDDM13A0A1B0GTR0 161 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 I6L893 689 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 LDOC1O95751 146 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 PRB1P04280 392 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 GGCXP38435 758 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 STX17P56962 302 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 C21orf59P57076 290 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 ST8SIA6P61647 398 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 GCNT1Q02742 428 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 CENPCQ03188 943 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 KCNH2Q12809 1159 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 SFMBT2Q5VUG0 894 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 FBXL19Q6PCT2 694 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 BEND5Q7L4P6 421 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 C14orf80Q86SX3 495 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 CHSY1Q86X52 802 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 PDCD7Q8N8D1 485 aaKnown RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 ZNF606Q8WXB4 792 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 DHTKD1Q96HY7 919 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 CNDP2Q96KP4 475 aaKnown RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 OMDQ99983 421 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 AASDHPPTQ9NRN7 309 aa16.43■□□□□ 0.22
RAB40C-202ENST00000509637 AJAP1Q9UKB5 411 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-202ENST00000509637 TLR4O00206 839 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 C5AR1P21730 350 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 EPHA8P29322 1005 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-202ENST00000509637 PLK1P53350 603 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 TAS2R38P59533 333 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 STILQ15468 1287 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 POM121L1PQ3SYA9 428 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 OTUD1Q5VV17 481 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-202ENST00000509637 FBXL22Q6P050 247 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 TMPRSS12Q86WS5 348 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 NELFBQ8WX92 580 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 SERAC1Q96JX3 654 aa16.42■□□□□ 0.22
RAB40C-202ENST00000509637 PTPRQQ9UMZ3 2332 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 LRRC72A6NJI9 287 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 P4HA2O15460 535 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 LETM1O95202 739 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 ZIC2O95409 532 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 IL1BP01584 269 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 ITGAVP06756 1048 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 TFE3P19532 575 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 MAT2AP31153 395 aaKnown RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 RXRGP48443 463 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 MORC3Q14149 939 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 DEFB106AQ8N104 65 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 DCBLD2Q96PD2 775 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 CPXM1Q96SM3 734 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 DDX50Q9BQ39 737 aaKnown RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 PCDHGA1Q9Y5H4 931 aa16.41■□□□□ 0.22
RAB40C-202ENST00000509637 TDRD6O60522 2096 aaKnown RBP16.41■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3DA0A087WVF3 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3IA0A087WXS9 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3EA0A087X179 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3KA0A087X1G2 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3FA6NER0 549 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3LB9A6J9 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 BIN1O00499 593 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TRIM38O00635 465 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 DFNA5O60443 496 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 RNASEH1O60930 286 aaKnown RBP16.4■□□□□ 0.22
RAB40C-202ENST00000509637 GRAP2O75791 330 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 C1QL1O75973 258 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 SMC2O95347 1197 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 MT-CO1P00395 513 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 CTSLP07711 333 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3HP0C7X1 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 GIMD1P0DJR0 217 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 KRT5P13647 590 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 MARSP56192 900 aaKnown RBP16.4■□□□□ 0.22
RAB40C-202ENST00000509637 YWHAZP63104 245 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms