RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NCAPHQ15003 741 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 HNRNPA1L2Q32P51 320 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 CXorf57Q6NSI4 855 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 CAVIN1Q6NZI2 390 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 RABEPKQ7Z6M1 372 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 MMAAQ8IVH4 418 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 MINDY1Q8N5J2 469 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 DEFB124Q8NES8 71 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 OR52K2Q8NGK3 314 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 C11orf70Q9BRQ4 267 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 HSD3B7Q9H2F3 369 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 SEPT11Q9NVA2 429 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 ASCC3Q8N3C0 2202 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 TMEM131Q92545 1883 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 METTL12A8MUP2 240 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 ARHGAP33O14559 1287 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 CNTN5O94779 1100 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 SEMA4FO95754 770 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 IGLV3-19P01714 112 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 SRPRAP08240 638 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 GNSP15586 552 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 PSMD8P48556 350 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 CXCR3P49682 368 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 ATP11AP98196 1134 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 ZNF177Q13360 481 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 CDO1Q16878 200 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 SLC25A52Q3SY17 297 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 TTC31Q49AM3 519 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 RAB6CQ53S08 254 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 C9orf64Q5T6V5 341 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 ZNF677Q86XU0 584 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 CADM4Q8NFZ8 388 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 BTBD1Q9H0C5 482 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 RAB6CQ9H0N0 254 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 RSPH9Q9H1X1 276 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 FBRSQ9HAH7 460 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 ARHGEF38Q9NXL2 777 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 RRN3Q9NYV6 651 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 SERGEFQ9UGK8 458 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 SUSD2Q9UGT4 822 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 SLCO1B1Q9Y6L6 691 aa15.25■□□□□ 0.03
UBE2D3-228ENST00000508974 DOCK4Q8N1I0 1966 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 EDDM13A0A1B0GTR0 161 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 MID1O15344 667 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 RNASEH1O60930 286 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 FSBPO95073 299 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 CYP1A1P04798 512 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 SCNN1AP37088 669 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 SLC12A1Q13621 1099 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 CST6Q15828 149 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 ACCSLQ4AC99 568 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 ALFQ53S48 1182 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 BRMS1LQ5PSV4 323 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 APTXQ7Z2E3 356 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 TFAP2DQ7Z6R9 452 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 FAM131BQ86XD5 332 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 STK40Q8N2I9 435 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 NT5C3BQ969T7 300 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 PCDHB18PQ96TA0 734 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 MUC3BQ9H195 1237 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 TMEM59LQ9UK28 342 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 VPS28Q9UK41 221 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 NCKAP1Q9Y2A7 1128 aa15.24■□□□□ 0.03
UBE2D3-228ENST00000508974 ITIH6Q6UXX5 1313 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 A0A1B0GTW7 788 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 A0A1W2PP55 124 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 BNIP3LO60238 219 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 OPHN1O60890 802 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 CLDN11O75508 207 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 RNASEH2AO75792 299 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 F9P00740 461 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 SYPP08247 313 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 NNMTP40261 264 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 ZBTB16Q05516 673 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 ZNF252P-AS1Q0IIN9 211 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 GRIK2Q13002 908 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 C15orf59Q2T9L4 293 aaPredicted RBP15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 JOSD2Q8TAC2 188 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 DNASE2BQ8WZ79 361 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 PTPRN2Q92932 1015 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 PGAP3Q96FM1 320 aaPredicted RBP15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 CNTNAP3BQ96NU0 1288 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 OMDQ99983 421 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 FEM1AQ9BSK4 669 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 CNTNAP3Q9BZ76 1288 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 NAT10Q9H0A0 1025 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 FBXL12Q9NXK8 326 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 MPP6Q9NZW5 540 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 PAXBP1Q9Y5B6 917 aa15.23■□□□□ 0.03
UBE2D3-228ENST00000508974 TARSL2A2RTX5 802 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-228ENST00000508974 PLK4O00444 970 aa15.22■□□□□ 0.03
UBE2D3-228ENST00000508974 BCAT2O15382 392 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-228ENST00000508974 TEX33O43247 280 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms