RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SLC35D1Q9NTN3 355 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ATAD3AQ9NVI7 634 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TEKT2Q9UIF3 430 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 KCND3Q9UK17 655 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PACSIN2Q9UNF0 486 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GPR52Q9Y2T5 361 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DERAQ9Y315 318 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 KCNE2Q9Y6J6 123 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TP73O15350 636 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SYNCRIPO60506 623 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PFKFB2O60825 505 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DIRAS3O95661 229 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZFXP17010 805 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CD40LGP29965 261 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 HOXA10P31260 410 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MCM5P33992 734 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MCAMP43121 646 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GBX2P52951 348 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 EIF3BP55884 814 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 KCNK10P57789 538 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SEMA5AQ13591 1074 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 IQCB1Q15051 598 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MPEG1Q2M385 716 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 JMJD6Q6NYC1 403 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZBTB49Q6ZSB9 765 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CHST9Q7L1S5 443 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 KCTD9Q7L273 389 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 C16orf62Q7Z3J2 963 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PODNQ7Z5L7 613 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CUZD1Q86UP6 607 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 POC5Q8NA72 575 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 C3orf20Q8ND61 904 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PIK3C3Q8NEB9 887 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BPIFCQ8NFQ6 507 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CALML6Q8TD86 181 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GPBAR1Q8TDU6 330 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DENND1AQ8TEH3 1009 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RNF139Q8WU17 664 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 APIPQ96GX9 242 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZC3HAV1LQ96H79 300 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 WDR24Q96S15 920 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MGME1Q9BQP7 344 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 HERC2P3Q9BVR0 1158 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 COLEC11Q9BWP8 271 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BRIP1Q9BX63 1249 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CFHR5Q9BXR6 569 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CD244Q9BZW8 370 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ADNPQ9H2P0 1102 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SYTL2Q9HCH5 934 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CENPMQ9NSP4 180 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NENFQ9UMX5 172 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MSRB2Q9Y3D2 182 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TGFB3P10600 412 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 BCRP11274 1271 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CYP2A6P11509 494 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DNASE1P24855 282 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 RAP2BP61225 183 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 MRPS9P82933 396 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ACTN3Q08043 901 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DAG1Q14118 895 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TEAD4Q15561 434 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DPCR1Q3MIW9 517 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FOXR1Q6PIV2 292 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CCDC155Q8N6L0 562 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ACMSDQ8TDX5 336 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 RSAD2Q8WXG1 361 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 BSNDQ8WZ55 320 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CHMP6Q96FZ7 201 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FAM227BQ96M60 508 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TXN2Q99757 166 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ARHGAP39Q9C0H5 1083 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 INTS2Q9H0H0 1204 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NDST4Q9H3R1 872 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 RNF41Q9H4P4 317 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 POLR3BQ9NW08 1133 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GGA3Q9NZ52 723 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 EHD3Q9NZN3 535 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HDAC6Q9UBN7 1215 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ATP23Q9Y6H3 246 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SESN1Q9Y6P5 492 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CDC14CA4D256 554 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 KIF28PB7ZC32 967 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 H0Y8G0 127 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CLASP2O75122 1294 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ENDOD1O94919 500 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CYP17A1P05093 508 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TPOP07202 933 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HSPD1P10809 573 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NPR3P17342 541 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TCEA1P23193 301 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GPTP24298 496 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HMOX2P30519 316 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 PCGF2P35227 344 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HK2P52789 917 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GALCP54803 685 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DCAF7P61962 342 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ERVK-9P63128 1117 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GPS1Q13098 491 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 KCNAB2Q13303 367 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CNGA2Q16280 664 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms