RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PLK1P53350 603 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 ECT2LQ008S8 904 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 CSTF1Q05048 431 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 KIF5AQ12840 1032 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 BYSLQ13895 437 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 KRT81Q14533 505 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 CRY1Q16526 586 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 DPYSL2Q16555 572 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 PLEKHG6Q3KR16 790 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 FUT11Q495W5 492 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 FNDC3BQ53EP0 1204 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 ZFYVE27Q5T4F4 411 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 EGFLAMQ63HQ2 1017 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 CXorf57Q6NSI4 855 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 RETSATQ6NUM9 610 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 POLNQ7Z5Q5 900 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 TFAP2DQ7Z6R9 452 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 C14orf80Q86SX3 495 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 ADIPOR2Q86V24 386 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 ZNF683Q8IZ20 524 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 LZTR1Q8N653 840 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 DCAF4L2Q8NA75 395 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 UBE2Q2Q8WVN8 375 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 IGSF8Q969P0 613 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 TTC17Q96AE7 1141 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 GABRG3Q99928 467 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 FEM1AQ9BSK4 669 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 SNRNP25Q9BV90 132 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 TRIM7Q9C029 511 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 MAGEH1Q9H213 219 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 DHX35Q9H5Z1 703 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 ANLNQ9NQW6 1124 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUP54-207ENST00000508583 TMEM248Q9NWD8 314 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 RCOR3Q9P2K3 495 aaPredicted RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 THAP10Q9P2Z0 257 aaPredicted RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 SUN2Q9UH99 717 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUP54-207ENST00000508583 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 CACNA1IQ9P0X4 2223 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 ATG2BQ96BY7 2078 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 ZSCAN5CA6NGD5 496 aaPredicted RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 WASH4PA8MWX3 477 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 I6L893 689 aaPredicted RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 TRIM24O15164 1050 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 SPOPO43791 374 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 PTMAP06454 111 aaKnown RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 CD70P32970 193 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 CNR2P34972 360 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 SERPINB6P35237 376 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 YBEYP58557 167 aaPredicted RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 SATB1Q01826 763 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 SLC25A11Q02978 314 aaKnown RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 GNA12Q03113 381 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 SLC20A2Q08357 652 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 SFSWAPQ12872 951 aaKnown RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 SEMA3BQ13214 749 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 GAS6Q14393 721 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 ZNF234Q14588 700 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 MESDQ14696 234 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 PDK2Q15119 407 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 PARP15Q460N3 678 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 ALFQ53S48 1182 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 PPP6R3Q5H9R7 873 aaPredicted RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 FSCBQ5H9T9 825 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 LRRC38Q5VT99 294 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 C11orf63Q6NUN7 778 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 RFX8Q6ZV50 586 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 C11orf74Q86VG3 221 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 VSIG1Q86XK7 387 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 CCDC33Q8N5R6 958 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 RTL3Q8N8U3 475 aaKnown RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 WFDC5Q8TCV5 224 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 ATRIPQ8WXE1 791 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 HSPH1Q92598 858 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 EZH1Q92800 747 aaPredicted RBP9.38□□□□□ -0.91
NUP54-207ENST00000508583 MYEOVQ96EZ4 313 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 CCDC114Q96M63 670 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 SEMA4AQ9H3S1 761 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 OSGEPQ9NPF4 335 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 ZSCAN32Q9NX65 697 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 BCCIPQ9P287 314 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP54-207ENST00000508583 EBF1Q9UH73 591 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 CLEC4EQ9ULY5 219 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 STON1Q9Y6Q2 735 aa9.38□□□□□ -0.91
NUP54-207ENST00000508583 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 SGK1O00141 431 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 KRT86O43790 486 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 RNASEH1O60930 286 aaKnown RBP9.37□□□□□ -0.91
NUP54-207ENST00000508583 CNTN5O94779 1100 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 EPHX1P07099 455 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 SP9P0CG40 484 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 RARAP10276 462 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 COL9A1P20849 921 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms