RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 VAV1P15498 845 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 ABCB4P21439 1286 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 GABRB2P47870 512 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 CSNK1EP49674 416 aaKnown RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 KLK7P49862 253 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 SIM1P81133 766 aaPredicted RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 SLC14A1Q13336 389 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 AUHQ13825 339 aaKnown RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 CST6Q15828 149 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 C5orf22Q49AR2 442 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 C2CD6Q53TS8 623 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 TRNP1Q6NT89 227 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 NOP9Q86U38 636 aaKnown RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 MMAAQ8IVH4 418 aaKnown RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 SNX19Q92543 992 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 ZDHHC5Q9C0B5 715 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 NEUROG2Q9H2A3 272 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 SGK2Q9HBY8 427 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 TMPRSS4Q9NRS4 437 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 FBXL12Q9NXK8 326 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 TAB2Q9NYJ8 693 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 SLC12A6Q9UHW9 1150 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 VANGL2Q9ULK5 521 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 FNDC3AQ9Y2H6 1198 aaKnown RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 OR51B4Q9Y5P0 310 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 SNX10Q9Y5X0 201 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 A0A1B0GVM2 712 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 A0A1W2PP55 124 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 FAM221BA6H8Z2 402 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 TCAF2A6NFQ2 919 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 HYAL3O43820 417 aaPredicted RBP16.71■□□□□ 0.27
LMNA-222ENST00000508500 CBFA2T3O75081 653 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 MOCS3O95396 460 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 ADCY5O95622 1261 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 SLC2A3P11169 496 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 MATKP42679 507 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 GALCP54803 685 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 SLC12A1Q13621 1099 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 HLA-BQ31612 363 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 KCNT1Q5JUK3 1230 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 CDKAL1Q5VV42 579 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 TAF3Q5VWG9 929 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 LAYNQ6UX15 382 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 RBM43Q6ZSC3 357 aaKnown RBP16.71■□□□□ 0.27
LMNA-222ENST00000508500 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 XYLT1Q86Y38 959 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 CCDC117Q8IWD4 279 aaPredicted RBP16.71■□□□□ 0.27
LMNA-222ENST00000508500 ZNF683Q8IZ20 524 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 STK40Q8N2I9 435 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 AADATQ8N5Z0 425 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 FRS2Q8WU20 508 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 RNF34Q969K3 372 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 NOX5Q96PH1 765 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 GANQ9H2C0 597 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 GAREM1Q9H706 876 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 TM9SF3Q9HD45 589 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 DACH1Q9UI36 760 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 NEUROG3Q9Y4Z2 214 aa16.71■□□□□ 0.27
LMNA-222ENST00000508500 TDRD6O60522 2096 aaKnown RBP16.71■□□□□ 0.27
LMNA-222ENST00000508500 CACNA1GO43497 2377 aa16.71■□□□□ 0.26
LMNA-222ENST00000508500 EDDM13A0A1B0GTR0 161 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 CNTN5O94779 1100 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 FSBPO95073 299 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 MMEP08473 750 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
LMNA-222ENST00000508500 SLC8A1P32418 973 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 CXCR3P49682 368 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 METAP1P53582 386 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 BPIFB4P59827 614 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 RNASE9P60153 205 aaKnown RBP16.7■□□□□ 0.26
LMNA-222ENST00000508500 KIF19Q2TAC6 998 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 TTC31Q49AM3 519 aaPredicted RBP16.7■□□□□ 0.26
LMNA-222ENST00000508500 CT47A1Q5JQC4 288 aaPredicted RBP16.7■□□□□ 0.26
LMNA-222ENST00000508500 RABGAP1LQ5R372 815 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 KIAA0895LQ68EN5 471 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 DBX2Q6ZNG2 339 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 BNIPLQ7Z465 357 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 NAXDQ8IW45 347 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 TMEM35BQ8NCS4 154 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
LMNA-222ENST00000508500 RPRD1AQ96P16 312 aaPredicted RBP16.7■□□□□ 0.26
LMNA-222ENST00000508500 TBCBQ99426 244 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 FEM1AQ9BSK4 669 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 STK33Q9BYT3 514 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 SYNCQ9H7C4 482 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMNA-222ENST00000508500 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 KLK13Q9UKR3 277 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 SCML1Q9UN30 329 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 SNX11Q9Y5W9 270 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 BAHCC1Q9P281 2608 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 ITPR1Q14643 2758 aa16.7■□□□□ 0.26
LMNA-222ENST00000508500 GOLGA4Q13439 2230 aaKnown RBP16.69■□□□□ 0.26
LMNA-222ENST00000508500 SRRM3A6NNA2 597 aaPredicted RBP16.69■□□□□ 0.26
LMNA-222ENST00000508500 F8VZ95 297 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms