RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 DBF4BQ8NFT6 615 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 CDKL2Q92772 493 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 FCRL2Q96LA5 508 aaPredicted RBP18.07■□□□□ 0.48
SFXN1-208ENST00000507823 RMDN2Q96LZ7 410 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 IL12RB2Q99665 862 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 SFMBT1Q9UHJ3 866 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 GREB1Q4ZG55 1949 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 AP3B1O00203 1094 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 CRHR1P34998 444 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 CRADDP78560 199 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 BNIP1Q12981 228 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 LRRC49Q8IUZ0 686 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 SCN4BQ8IWT1 228 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 ZNF683Q8IZ20 524 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 CNTD1Q8N815 330 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 CCDC63Q8NA47 563 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 OR52K1Q8NGK4 314 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 C12orf65Q9H3J6 166 aaKnown RBP18.07■□□□□ 0.48
SFXN1-208ENST00000507823 MANSC1Q9H8J5 431 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 LRRC40Q9H9A6 602 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 COMMD8Q9NX08 183 aa18.07■□□□□ 0.48
SFXN1-208ENST00000507823 POLBP06746 335 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 NFKB1P19838 968 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 NPY2RP49146 381 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 MLLT6P55198 1093 aaPredicted RBP18.06■□□□□ 0.48
SFXN1-208ENST00000507823 ZNF280DQ6N043 979 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 PACS1Q6VY07 963 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 ANKLE1Q8NAG6 615 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 C10orf82Q8WW14 230 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 FATE1Q969F0 183 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 FAM111AQ96PZ2 611 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 CLIC5Q9NZA1 410 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 PCDHB7Q9Y5E2 793 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 USH1CQ9Y6N9 552 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 MAGEB16A2A368 324 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 MSI1O43347 362 aaKnown RBP18.06■□□□□ 0.48
SFXN1-208ENST00000507823 FKTNO75072 461 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 USP1O94782 785 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 UBOX5O94941 541 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 SERPINB4P48594 390 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 SMARCB1Q12824 385 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 CTXN3Q4LDR2 81 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 CASC4Q6P4E1 433 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 FITM2Q8N6M3 262 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 RTL3Q8N8U3 475 aaKnown RBP18.06■□□□□ 0.48
SFXN1-208ENST00000507823 PTPRN2Q92932 1015 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 TMEM175Q9BSA9 504 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 VANGL2Q9ULK5 521 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 HS3ST4Q9Y661 456 aa18.06■□□□□ 0.48
SFXN1-208ENST00000507823 MAFKO60675 156 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 RASSF9O75901 435 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 TGDSO95455 350 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 SLC2A3P11169 496 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 SF3A3Q12874 501 aaKnown RBP eCLIP18.05■□□□□ 0.482e-12■■■□□ 17.3
SFXN1-208ENST00000507823 DBN1Q16643 649 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 SPDYAQ5MJ70 313 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 UNC5BQ8IZJ1 945 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 SEPT8Q92599 483 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 ISL2Q96A47 359 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 CELF6Q96J87 481 aaKnown RBP18.05■□□□□ 0.48
SFXN1-208ENST00000507823 SPATA17Q96L03 361 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 AGAP3Q96P47 875 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 OXCT2Q9BYC2 517 aaPredicted RBP18.05■□□□□ 0.48
SFXN1-208ENST00000507823 GPR62Q9BZJ7 368 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 BFARQ9NZS9 450 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 TANC1Q9C0D5 1861 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 FAM237BA0A1B0GVD1 139 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 ARHGAP42A6NI28 874 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 JCHAINP01591 159 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 GPR15P49685 360 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 BMPR2Q13873 1038 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 DDR2Q16832 855 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 ABI1Q8IZP0 508 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 CERS2Q96G23 380 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 FCRL3Q96P31 734 aaPredicted RBP18.05■□□□□ 0.48
SFXN1-208ENST00000507823 FCRL5Q96RD9 977 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 SIK2Q9H0K1 926 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 DOCK4Q8N1I0 1966 aa18.05■□□□□ 0.48
SFXN1-208ENST00000507823 NYNRINQ9P2P1 1898 aaKnown RBP18.05■□□□□ 0.48
SFXN1-208ENST00000507823 ZCWPW2A0A1B0GU75 182 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 E9PAM4 449 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 MATN3O15232 486 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 HOXA2O43364 376 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 SRGAP2BP0DMP2 458 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 SKIV2L2P42285 1042 aaKnown RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 USP46P62068 366 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 GPR17Q13304 367 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 FAM171A1Q5VUB5 890 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 RWDD4Q6NW29 188 aaKnown RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 RAB3IL1Q8TBN0 382 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 PPP1R2P1Q96PQ5 205 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 SIRPGQ9P1W8 387 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 CEP350Q5VT06 3117 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 RTN3O95197 1032 aaPredicted RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 VNN2O95498 520 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 ALDH2P05091 517 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 SLC11A1P49279 550 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 ELAVL2Q12926 359 aaKnown RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 TCTN1Q2MV58 587 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 PACS2Q86VP3 889 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms