RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 IL1BP01584 269 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 IGLV3-25P01717 112 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 PDGFRAP16234 1089 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 GOT1P17174 413 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 C5AR1P21730 350 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 MZF1P28698 734 aaPredicted RBP11.74□□□□□ -0.53
SIL1-208ENST00000505945 CD38P28907 300 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 GNA15P30679 374 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
SIL1-208ENST00000505945 CYP4F3Q08477 520 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 EIF4EBP2Q13542 120 aaPredicted RBP11.74□□□□□ -0.53
SIL1-208ENST00000505945 COL28A1Q2UY09 1125 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 GJB7Q6PEY0 223 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 DHRS13Q6UX07 377 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 CCAR2Q8N163 923 aaKnown RBP11.74□□□□□ -0.53
SIL1-208ENST00000505945 GALNT15Q8N3T1 639 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 OR14C36Q8NHC7 312 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 HNRNPLLQ8WVV9 542 aaKnown RBP11.74□□□□□ -0.53
SIL1-208ENST00000505945 SKA1Q96BD8 255 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 ELF4Q99607 663 aaPredicted RBP11.74□□□□□ -0.53
SIL1-208ENST00000505945 CRACR2AQ9BSW2 395 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 TRIM62Q9BVG3 475 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.74□□□□□ -0.53
SIL1-208ENST00000505945 FTSJ1Q9UET6 329 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 SLC12A6Q9UHW9 1150 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 FZD4Q9ULV1 537 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 ASXL3Q9C0F0 2248 aa11.74□□□□□ -0.53
SIL1-208ENST00000505945 SYNJ2BP-COX16A0A087WUM0 186 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3DA0A087WVF3 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3IA0A087WXS9 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3EA0A087X179 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3KA0A087X1G2 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 A0A1W2PR77 199 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3FA6NER0 549 aaPredicted RBP11.73□□□□□ -0.53
SIL1-208ENST00000505945 BECN2A8MW95 431 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 C10orf142B7Z368 130 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3LB9A6J9 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 CBX4O00257 560 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 ADH1BP00325 375 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3HP0C7X1 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 NNMTP40261 264 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 USP8P40818 1118 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 CCR5P51681 352 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 METAP1P53582 386 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 ADPRHP54922 357 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 APBA1Q02410 837 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 PAK1Q13153 545 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 CAMK2BQ13554 666 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 SHBQ15464 509 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 SMAD1Q15797 465 aaKnown RBP11.73□□□□□ -0.53
SIL1-208ENST00000505945 MEA1Q16626 185 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 ARHGAP44Q17R89 818 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3GQ6DHY5 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3CQ6IPX1 549 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.73□□□□□ -0.53
SIL1-208ENST00000505945 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.531e-7■■■■□ 22.5
SIL1-208ENST00000505945 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 TBC1D3Q8IZP1 549 aaPredicted RBP11.73□□□□□ -0.53
SIL1-208ENST00000505945 DEFB106AQ8N104 65 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 WDTC1Q8N5D0 677 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 ATP6V0D2Q8N8Y2 350 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 SERAC1Q96JX3 654 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 PRMT1Q99873 361 aaKnown RBP11.73□□□□□ -0.53
SIL1-208ENST00000505945 FAM204AQ9H8W3 233 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 DDIT4Q9NX09 232 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 COX16Q9P0S2 106 aa11.73□□□□□ -0.53
SIL1-208ENST00000505945 PLK4O00444 970 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 GADD45BO75293 160 aaPredicted RBP11.72□□□□□ -0.53
SIL1-208ENST00000505945 GRAP2O75791 330 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 LDOC1O95751 146 aaPredicted RBP11.72□□□□□ -0.53
SIL1-208ENST00000505945 ITGAVP06756 1048 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 SLC9A1P19634 815 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 ABCB4P21439 1286 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 DRD3P35462 400 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 PLK1P53350 603 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 CDK17Q00537 523 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 PDCLQ13371 301 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 SLC12A1Q13621 1099 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 BECN1Q14457 450 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 ELAVL3Q14576 367 aaKnown RBP11.72□□□□□ -0.53
SIL1-208ENST00000505945 INAVAQ3KP66 663 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 ACCSLQ4AC99 568 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 CXorf57Q6NSI4 855 aaKnown RBP11.72□□□□□ -0.53
SIL1-208ENST00000505945 FBXL22Q6P050 247 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 ENOSF1Q7L5Y1 443 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 PDZD3Q86UT5 571 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 PASD1Q8IV76 773 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 OR52K2Q8NGK3 314 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 RNF34Q969K3 372 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 CPXM1Q96SM3 734 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 GDF3Q9NR23 364 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 DKK4Q9UBT3 224 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 SARDHQ9UL12 918 aa11.72□□□□□ -0.53
SIL1-208ENST00000505945 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
SIL1-208ENST00000505945 A0A1B0GVM2 712 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 TLR4O00206 839 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 ENC1O14682 589 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms