RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NR2C2P49116 596 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 CLCN6P51797 869 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 IFI35P80217 286 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 ARF5P84085 180 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 LMAN2Q12907 356 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 ATP13A4Q4VNC1 1196 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 RAP1GAP2Q684P5 730 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 AHI1Q8N157 1196 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZNF830Q96NB3 372 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 FEM1AQ9BSK4 669 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 FBRSL1Q9HCM7 1045 aaKnown RBP8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC12A6Q9UHW9 1150 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 ATP8A1Q9Y2Q0 1164 aa8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 COL27A1Q8IZC6 1860 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE2-208ENST00000505065 F5H5T6 163 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 GPR37L1O60883 481 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 ASGR2P07307 311 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 GRIA2P42262 883 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 PPIDQ08752 370 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 NME3Q13232 169 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 C2orf27AQ580R0 203 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 TFDP3Q5H9I0 405 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC35B2Q8TB61 432 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 BRD8Q9H0E9 1235 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 LTB4R2Q9NPC1 389 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 ABCB8Q9NUT2 735 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 ETNK2Q9NVF9 386 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 TECTAO75443 2155 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 PRPSAP2O60256 369 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 TULP3O75386 442 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 IFRD2Q12894 506 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 RFTN1Q14699 578 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 HADHQ16836 314 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 MAML2Q8IZL2 1156 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 TERB1Q8NA31 727 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 HCAR2Q8TDS4 363 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 RBM41Q96IZ5 413 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 EBF3Q9H4W6 596 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 SMPD4Q9NXE4 827 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 PRRT4C9JH25 899 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 PRAMEF11O60813 436 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 ASLP04424 464 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 PYGMP11217 842 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 CD70P32970 193 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC6A11P48066 632 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 MRPS21P82921 87 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 OASLQ15646 514 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 PREPLQ4J6C6 727 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 INO80DQ53TQ3 878 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 RSRC2Q7L4I2 434 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 IL12RB2Q99665 862 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 GTSE1Q9NYZ3 720 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 GGA2Q9UJY4 613 aa8.51□□□□□ -1.05
CDC42SE2-208ENST00000505065 ALOX15BO15296 676 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 CLCN5P51795 746 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 RPS24P62847 133 aaKnown RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 MESDQ14696 234 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 DGKKQ5KSL6 1271 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 RFWD3Q6PCD5 774 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 MFSD7Q6UXD7 560 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 RASSF3Q86WH2 238 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 LGI2Q8N0V4 545 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZFYVE19Q96K21 471 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 PNKPQ96T60 521 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 UHRF1Q96T88 793 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 CATSPERBQ9H7T0 1116 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 KIAA1522Q9P206 1035 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 SNX12Q9UMY4 172 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 H3BRJ5 948 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ADAM23O75077 832 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 GALK1P51570 392 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 CAMK2GQ13555 558 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 RALGPS1Q5JS13 557 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 NAIF1Q69YI7 327 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 USP33Q8TEY7 942 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 NKD2Q969F2 451 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 RPGRIP1Q96KN7 1286 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 QKIQ96PU8 341 aaKnown RBP eCLIP8.5□□□□□ -1.052e-6■□□□□ 11
CDC42SE2-208ENST00000505065 EPAS1Q99814 870 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ARHGEF3Q9NR81 526 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 DTLQ9NZJ0 730 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 MUTYHQ9UIF7 546 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 PPIL1Q9Y3C6 166 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 KANSL1LA0AUZ9 987 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 DCXO43602 365 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 BUB1O43683 1085 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 CLSTN1O94985 981 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ERCC2P18074 760 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC20A2Q08357 652 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 FBXO43Q4G163 708 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 PITRM1Q5JRX3 1037 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 KIAA1328Q86T90 577 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 SFTPA1Q8IWL2 248 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ACDQ96AP0 544 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 NSMCE3Q96MG7 304 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms