RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SNX10Q9Y5X0 201 aa13.59□□□□□ -0.23
DDX41-204ENST00000504807 MGAQ8IWI9 3026 aa13.58□□□□□ -0.23
DDX41-204ENST00000504807 PTPRQQ9UMZ3 2332 aa13.58□□□□□ -0.23
DDX41-204ENST00000504807 ATMQ13315 3056 aa13.58□□□□□ -0.23
DDX41-204ENST00000504807 SYNJ2BP-COX16A0A087WUM0 186 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 CAPN8A6NHC0 703 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 C10orf142B7Z368 130 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 MED7O43513 233 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 LUC7L3O95232 432 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 EIF2S3P41091 472 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 ZNF445P59923 1031 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 CHSY1Q86X52 802 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 FAM71AQ8IYT1 594 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 GALNT15Q8N3T1 639 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 GPT2Q8TD30 523 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 GOLGA1Q92805 767 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 ALG14Q96F25 216 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 TUBGCP2Q9BSJ2 902 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 MIR1-1HGQ9H1L0 117 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 TOR4AQ9NXH8 423 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 COX16Q9P0S2 106 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 EIF2B4Q9UI10 523 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 ERVW-1Q9UQF0 538 aa13.58□□□□□ -0.24
DDX41-204ENST00000504807 NYNRINQ9P2P1 1898 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 GOLGA4Q13439 2230 aaKnown RBP13.58□□□□□ -0.24
DDX41-204ENST00000504807 MEI4A8MW99 385 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 EPHB6O15197 1021 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 POLR2EP19388 210 aaKnown RBP13.57□□□□□ -0.24
DDX41-204ENST00000504807 ARID5AQ03989 594 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 RAB6CQ53S08 254 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 TAF1BQ53T94 588 aaPredicted RBP13.57□□□□□ -0.24
DDX41-204ENST00000504807 CCDC157Q569K6 752 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 FBXL22Q6P050 247 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 GPR155Q7Z3F1 870 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 CADM4Q8NFZ8 388 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 RAB6CQ9H0N0 254 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 RSPH9Q9H1X1 276 aaPredicted RBP13.57□□□□□ -0.24
DDX41-204ENST00000504807 PIGVQ9NUD9 493 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 DDIT4Q9NX09 232 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 PLA2G4CQ9UP65 541 aa13.57□□□□□ -0.24
DDX41-204ENST00000504807 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.57□□□□□ -0.24
DDX41-204ENST00000504807 TEX51A0A1B0GUA7 166 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 RNF103O00237 685 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 WNT9AO14904 365 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 ZBTB24O43167 697 aaPredicted RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 WISP1O95388 367 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 ADCY5O95622 1261 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 IGHV4-34P06331 123 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 ACADMP11310 421 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 CDH18Q13634 790 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 KCNJ12Q14500 433 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 DRAP1Q14919 205 aaPredicted RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 HNRNPA1L2Q32P51 320 aaKnown RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 KLHDC7AQ5VTJ3 777 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 OR6B2Q6IFH4 312 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 NOP9Q86U38 636 aaKnown RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 ZNF683Q8IZ20 524 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 AADATQ8N5Z0 425 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 FOXJ1Q92949 421 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 BTN2A3PQ96KV6 586 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 NUP58Q9BVL2 599 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 IRX2Q9BZI1 471 aaPredicted RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 GANQ9H2C0 597 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 FAM204AQ9H8W3 233 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 TAB2Q9NYJ8 693 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 FNDC3AQ9Y2H6 1198 aaKnown RBP13.56□□□□□ -0.24
DDX41-204ENST00000504807 HS3ST4Q9Y661 456 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 PTPRBP23467 1997 aa13.56□□□□□ -0.24
DDX41-204ENST00000504807 PLXNA2O75051 1894 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 A0A1B0GTW7 788 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 PLK4O00444 970 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 KCNK3O14649 394 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 MID1O15344 667 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 TLX3O43711 291 aaPredicted RBP13.55□□□□□ -0.24
DDX41-204ENST00000504807 DAB1O75553 588 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 CNTN5O94779 1100 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 APOEP02649 317 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 ATP5BP06576 529 aaKnown RBP13.55□□□□□ -0.24
DDX41-204ENST00000504807 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
DDX41-204ENST00000504807 CYP11B1P15538 503 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 ERCC5P28715 1186 aaPredicted RBP13.55□□□□□ -0.24
DDX41-204ENST00000504807 OXTRP30559 389 aa13.55□□□□□ -0.24
DDX41-204ENST00000504807 CDH5P33151 784 aaPredicted RBP13.55□□□□□ -0.24
DDX41-204ENST00000504807 CSNK1EP49674 416 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms