RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 WDR11Q9BZH6 1224 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 CLSTN2Q9H4D0 955 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 GSX1Q9H4S2 264 aaPredicted RBP5.42□□□□□ -1.54
NIPBL-204ENST00000504430 SLC35C2Q9NQQ7 365 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 LIMA1Q9UHB6 759 aaKnown RBP5.42□□□□□ -1.54
NIPBL-204ENST00000504430 TEKT2Q9UIF3 430 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 SPAG9O60271 1321 aaKnown RBP5.42□□□□□ -1.54
NIPBL-204ENST00000504430 PRR5-ARHGAP8B1AHC4 643 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 H3BS24 57 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 LDLRAD4O15165 306 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 PROCP04070 461 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 CAPN2P17655 700 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 NR2F2P24468 414 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 CSF2RBP32927 897 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 CRKLP46109 303 aaKnown RBP5.42□□□□□ -1.54
NIPBL-204ENST00000504430 YPEL5P62699 121 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 GPS1Q13098 491 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 SNTB1Q13884 538 aaKnown RBP5.42□□□□□ -1.54
NIPBL-204ENST00000504430 BOP1Q14137 746 aaKnown RBP5.42□□□□□ -1.54
NIPBL-204ENST00000504430 IL11RAQ14626 422 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 VEPH1Q14D04 833 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 OGFOD3Q6PK18 319 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 IRF2BP1Q8IU81 584 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 FAM185AQ8N0U4 392 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 RASGEF1CQ8N431 466 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 LINC00116Q8NCU8 138 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 MAD2L2Q9UI95 211 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 TLK1Q9UKI8 766 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 CNTN6Q9UQ52 1028 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 PCDHB7Q9Y5E2 793 aa5.42□□□□□ -1.54
NIPBL-204ENST00000504430 ZCCHC6Q5VYS8 1495 aaKnown RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 XKRY2A2RUG3 117 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 ADAMDEC1O15204 470 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PRPF4O43172 522 aaKnown RBP eCLIP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 FAM87AP0C7U9 286 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 ETS1P14921 441 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 HOXC8P31273 242 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CCNHP51946 323 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 MYL6P60660 151 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TAP2Q03519 686 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 GFPT1Q06210 699 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 USH1GQ495M9 461 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 FAM83HQ6ZRV2 1179 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 SLC22A9Q8IVM8 553 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TTC5Q8N0Z6 440 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 Q8N1Y9 231 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PLD5Q8N7P1 536 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 RASSF8Q8NHQ8 419 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CDCA5Q96FF9 252 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CARD6Q9BX69 1037 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TP63Q9H3D4 680 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TMEM8AQ9HCN3 771 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 NGBQ9NPG2 151 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 C1GALT1Q9NS00 363 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PSME2Q9UL46 239 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TRAF3IP3Q9Y228 551 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PCDHA10Q9Y5I2 948 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CCDC151A5D8V7 595 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 FAM171A2A8MVW0 826 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CXCL11O14625 94 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 GRM6O15303 877 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CYTIPO60759 359 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 AKAP3O75969 853 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 HEXIM1O94992 359 aaKnown RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 SERPINC1P01008 464 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 RB1P06400 928 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PSMC2P35998 433 aaKnown RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 SLC15A1P46059 708 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 FAM3BP58499 235 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 IL24Q13007 206 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 HYAL4Q2M3T9 481 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 MST1LQ2TV78 715 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 P3H1Q32P28 736 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF772Q68DY9 489 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PPP1R21Q6ZMI0 780 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 DGLUCYQ7Z3D6 616 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 GLB1L2Q8IW92 636 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 FAM133AQ8N9E0 248 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 DENND2DQ9H6A0 471 aaPredicted RBP5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TRPV5Q9NQA5 729 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 INTS13Q9NVM9 706 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 PLA2G3Q9NZ20 509 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 DNAJB11Q9UBS4 358 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 FTSJ1Q9UET6 329 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 CLEC4AQ9UMR7 237 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 ZHX2Q9Y6X8 837 aa5.41□□□□□ -1.54
NIPBL-204ENST00000504430 TRBV23OR9-2A0A075B6M9 112 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 C5orf51A6NDU8 294 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 AGAP5A6NIR3 686 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MYO1GB0I1T2 1018 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 POP4O95707 220 aaKnown RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PLGP00747 810 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 IL1AP01583 271 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 EPORP19235 508 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 STAT5BP51692 787 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PTH1RQ03431 593 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 RUNX2Q13950 521 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SLC9B1Q4ZJI4 515 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PLA1AQ53H76 456 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms