RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BTBD3Q9Y2F9 522 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 PCDHB4Q9Y5E5 795 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SLCO1B1Q9Y6L6 691 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 CELSR3Q9NYQ7 3312 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 ZFYVE26Q68DK2 2539 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 DOCK9Q9BZ29 2069 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ITPR1Q14643 2758 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 GOLGA4Q13439 2230 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 NBEAQ8NFP9 2946 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 LOC400499M0QZD8 3231 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 GOLGA6L7A0A1B0GV03 622 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 A0A1W2PP55 124 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 GTPBP10A4D1E9 387 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 CAPN8A6NHC0 703 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 F5H5T6 163 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 M0QYV0 167 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 TLR4O00206 839 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ENC1O14682 589 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 MCF2LO15068 1137 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 MID1O15344 667 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ATP9BO43861 1147 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ABCB7O75027 752 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RFPL3O75679 317 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RNASEH2AO75792 299 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 LDOC1O95751 146 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 TRUB2O95900 331 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 WNT1P04628 370 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ITGAVP06756 1048 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 TACR2P21452 398 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 MZF1P28698 734 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 CCR1P32246 355 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 DRD3P35462 400 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 EIF2S3P41091 472 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ACADVLP49748 655 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SNX16P57768 344 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RPS24P62847 133 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 E2F1Q01094 437 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 FSCBQ5H9T9 825 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RNF219Q5W0B1 726 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 TTI2Q6NXR4 508 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 NCEH1Q6PIU2 408 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 PRPF39Q86UA1 669 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ZDHHC17Q8IUH5 632 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 DHX40Q8IX18 779 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SMYD4Q8IYR2 804 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 AADATQ8N5Z0 425 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ZNF366Q8N895 744 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ATP6V0D2Q8N8Y2 350 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ZNF397Q8NF99 534 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SNIP1Q8TAD8 396 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 FRS2Q8WU20 508 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ZNF606Q8WXB4 792 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SNX19Q92543 992 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ERCC4Q92889 916 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 GRAMD1AQ96CP6 724 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 ALG14Q96F25 216 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC6A18Q96N87 628 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC2A13Q96QE2 648 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 UBL7Q96S82 380 aaPredicted RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 NUCKS1Q9H1E3 243 aaKnown RBP6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RETREG1Q9H6L5 497 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 USP29Q9HBJ7 922 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 PREBQ9HCU5 417 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RRN3Q9NYV6 651 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 SERGEFQ9UGK8 458 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 PCDHGC3Q9UN70 934 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 NAALADL1Q9UQQ1 740 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 HS3ST2Q9Y278 367 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D30Q9Y2I9 924 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 RAXQ9Y2V3 346 aa6.3□□□□□ -1.4
LSM3P4-201ENST00000502948 FASNP49327 2511 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 TEX51A0A1B0GUA7 166 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 TRIM49BA6NDI0 452 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 GOLGA6L4A6NEF3 574 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 TTC34A8MYJ7 566 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 C1QTNF3-AMACRE9PGA6 284 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 PRAMEF26H0Y7S4 382 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CAPN9O14815 690 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 HSF2BPO75031 334 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CLDN11O75508 207 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 DXOO77932 396 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 FGFR1OPO95684 399 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 AFPP02771 609 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 GP1BAP07359 652 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CKMT2P17540 419 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 ABCB4P21439 1286 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 BRD2P25440 801 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 SCNN1AP37088 669 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 ABCG1P45844 678 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 RGS7P49802 495 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CLCN6P51797 869 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 NUCB2P80303 420 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CYP4F3Q08477 520 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 KCNH2Q12809 1159 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 ZNF211Q13398 564 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms