RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ABCA5Q8WWZ7 1642 aa6.9□□□□□ -1.31
NEDD4-203ENST00000502612 ARHGEF17Q96PE2 2063 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 MANSC4A6NHS7 340 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 C17orf100A8MU93 164 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 PRRT4C9JH25 899 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 EPB41L2O43491 1005 aaKnown RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 AKAP8O43823 692 aaKnown RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 TSPAN3O60637 253 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 CD4P01730 458 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ENO1P06733 434 aaKnown RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 MVDP53602 400 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 VAMP2P63027 116 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ZBTB16Q05516 673 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 GALNT2Q10471 571 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 MTA1Q13330 715 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ALKBH1Q13686 389 aaKnown RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 CERKLQ49MI3 558 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 GXYLT1Q4G148 440 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 SH2D4BQ5SQS7 431 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 TMEM63BQ5T3F8 832 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 FBXO42Q6P3S6 717 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ZNF474Q6S9Z5 364 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 FAM110DQ8TAY7 271 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 IP6K1Q92551 441 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ZBTB10Q96DT7 871 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ADAD1Q96M93 576 aaKnown RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 SLC26A6Q9BXS9 759 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 TRIM31Q9BZY9 425 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 TTYH1Q9H313 450 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-203ENST00000502612 HDAC6Q9UBN7 1215 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 ARHGAP26Q9UNA1 814 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 CLSPNQ9HAW4 1339 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 IFT140Q96RY7 1462 aa6.89□□□□□ -1.31
NEDD4-203ENST00000502612 FYCO1Q9BQS8 1478 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 ANP32CO43423 234 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 WEE2P0C1S8 567 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 PKMP14618 531 aaKnown RBP6.88□□□□□ -1.31
NEDD4-203ENST00000502612 CD72P21854 359 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 TGM2P21980 687 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 TGFB2P61812 414 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 TUBA4AP68366 448 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 MPP1Q00013 466 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 RALBP1Q15311 655 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 LIPMQ5VYY2 423 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 DENND1BQ6P3S1 775 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 SLC30A9Q6PML9 568 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 C16orf71Q8IYS4 520 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-203ENST00000502612 LSM14AQ8ND56 463 aaKnown RBP6.88□□□□□ -1.31
NEDD4-203ENST00000502612 ST8SIA4Q92187 359 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 PIGKQ92643 395 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 ARL15Q9NXU5 204 aa6.88□□□□□ -1.31
NEDD4-203ENST00000502612 KIF21AQ7Z4S6 1674 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 TDRD9Q8NDG6 1382 aaKnown RBP6.87□□□□□ -1.31
NEDD4-203ENST00000502612 EMSYQ7Z589 1322 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.87□□□□□ -1.31
NEDD4-203ENST00000502612 SLC22A23A1A5C7 686 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 MCIDASD6RGH6 385 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 NUDT3O95989 172 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 BMP5P22003 454 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 TYK2P29597 1187 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 HOXA7P31268 230 aaPredicted RBP6.87□□□□□ -1.31
NEDD4-203ENST00000502612 GGT5P36269 586 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 ADPRHP54922 357 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 GPR162Q16538 588 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 AP5B1Q2VPB7 878 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 ZNF66Q6ZN08 573 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 RBM44Q6ZP01 1051 aaKnown RBP6.87□□□□□ -1.31
NEDD4-203ENST00000502612 ZNF788Q6ZQV5 615 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 BRSK2Q8IWQ3 736 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 C8orf58Q8NAV2 365 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 ZNF398Q8TD17 642 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 MAP4K1Q92918 833 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 P2RY11Q96G91 374 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 PAIP1Q9H074 479 aaKnown RBP6.87□□□□□ -1.31
NEDD4-203ENST00000502612 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 TXNRD2Q9NNW7 524 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 PDGFCQ9NRA1 345 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 CD207Q9UJ71 328 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 CTTNBP2Q8WZ74 1663 aa6.87□□□□□ -1.31
NEDD4-203ENST00000502612 GRIN2BQ13224 1484 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 RRBP1Q9P2E9 1410 aaKnown RBP6.86□□□□□ -1.31
NEDD4-203ENST00000502612 SPATA31A5Q5VU36 1347 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 SPATA31A6Q5VVP1 1343 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 SPATA31A7Q8IWB4 1347 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 TCRBV7S3A2A0A539 114 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 FAM90A7PA6NKC0 464 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 FAM90A22PA8MWA6 464 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 FAM90A12PA8MX19 464 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 FAM90A23PA8MXZ1 464 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 PLAUP00749 431 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 CYP4B1P13584 511 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 AKR1A1P14550 325 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 TACR3P29371 465 aa6.86□□□□□ -1.31
NEDD4-203ENST00000502612 PGM1P36871 562 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms