RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 SBK1Q52WX2 424 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 ZNF394Q53GI3 561 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 ARHGAP15Q53QZ3 475 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 TNNI3KQ59H18 835 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 VWA2Q5GFL6 755 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 KIAA1324Q6UXG2 1013 aaKnown RBP7.01□□□□□ -1.29
CRNDE-202ENST00000502066 GAREM2Q75VX8 874 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 ZFAND4Q86XD8 727 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 RBBP8NLQ8NC74 664 aaPredicted RBP7.01□□□□□ -1.29
CRNDE-202ENST00000502066 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 FUBP3Q96I24 572 aaKnown RBP eCLIP7.01□□□□□ -1.29
CRNDE-202ENST00000502066 CATSPER2Q96P56 530 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 MAP7D2Q96T17 732 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 TASP1Q9H6P5 420 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 ZNF287Q9HBT7 754 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 MCCC2Q9HCC0 563 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 CD248Q9HCU0 757 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 PCDHGA7Q9Y5G6 932 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 ZGRF1Q86YA3 2104 aa7.01□□□□□ -1.29
CRNDE-202ENST00000502066 OBSL1O75147 1896 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 GPR42O15529 346 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 STAM2O75886 525 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 CYP1A1P04798 512 aaPredicted RBP7□□□□□ -1.29
CRNDE-202ENST00000502066 UBTFL1P0CB47 393 aaPredicted RBP7□□□□□ -1.29
CRNDE-202ENST00000502066 PLS3P13797 630 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 HOXB2P14652 356 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 SLC6A11P48066 632 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 C21orf59P57076 290 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 HMBOX1Q6NT76 420 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 MILR1Q7Z6M3 343 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 MIB1Q86YT6 1006 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 DCP2Q8IU60 420 aaKnown RBP7□□□□□ -1.29
CRNDE-202ENST00000502066 LRRC71Q8N4P6 559 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 ARHGEF39Q8N4T4 335 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 Q8NA96 180 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 MCUQ8NE86 351 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 JPH3Q8WXH2 748 aaPredicted RBP7□□□□□ -1.29
CRNDE-202ENST00000502066 LRRCC1Q9C099 1032 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 UBA5Q9GZZ9 404 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 DEF6Q9H4E7 631 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 IL17RBQ9NRM6 502 aa7□□□□□ -1.29
CRNDE-202ENST00000502066 ING1Q9UK53 422 aaPredicted RBP7□□□□□ -1.29
CRNDE-202ENST00000502066 A0A1B0GVM2 712 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 A0A1W2PQF6 199 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 C22orf46C9J442 243 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 PRPF3O43395 683 aaKnown RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 THBDP07204 575 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 GABRR2P28476 465 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 EPHA8P29322 1005 aaPredicted RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 BFSP1Q12934 665 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 KLF10Q13118 480 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 ART3Q13508 389 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 TCTN3Q6NUS6 607 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 EFCAB12Q6NXP0 572 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 TRMT1LQ7Z2T5 733 aaKnown RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 NXPE1Q8N323 547 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 IGDCC4Q8TDY8 1250 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 APOBEC4Q8WW27 367 aaKnown RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 ARRDC3Q96B67 414 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 GRAMD1AQ96CP6 724 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 RRP36Q96EU6 259 aaKnown RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 SLC46A2Q9BY10 475 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 CHST11Q9NPF2 352 aa6.99□□□□□ -1.29
CRNDE-202ENST00000502066 DUS2Q9NX74 493 aaKnown RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 KLF2Q9Y5W3 355 aaPredicted RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 TNRC6AQ8NDV7 1962 aaKnown RBP6.99□□□□□ -1.29
CRNDE-202ENST00000502066 ANKUB1A6NFN9 424 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 BTBD18B2RXH4 712 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 KCNJ18B7U540 433 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 SHOX2O60902 331 aaPredicted RBP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 BCAR3O75815 825 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 PDHBP11177 359 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 SFPQP23246 707 aaKnown RBP eCLIP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 HTR1EP28566 365 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 DNAJA1P31689 397 aaKnown RBP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 IFNAR2P48551 515 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 ADAM8P78325 824 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 DEFA6Q01524 100 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 SLC7A5Q01650 507 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 ZNF543Q08ER8 600 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 NADK2Q4G0N4 442 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 SFMBT2Q5VUG0 894 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 CCDC13Q8IYE1 715 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 MAPK15Q8TD08 544 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 USP13Q92995 863 aaPredicted RBP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 ATP2A3Q93084 1043 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 C14orf79Q96F83 325 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 MRGPRX1Q96LB2 322 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 YTHDC1Q96MU7 727 aaKnown RBP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 GCOM2Q9BZD3 368 aaPredicted RBP6.98□□□□□ -1.29
CRNDE-202ENST00000502066 PCDH18Q9HCL0 1135 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 UBN1Q9NPG3 1134 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 PCDHA8Q9Y5H6 950 aa6.98□□□□□ -1.29
CRNDE-202ENST00000502066 TRBV23OR9-2A0A075B6M9 112 aa6.97□□□□□ -1.29
CRNDE-202ENST00000502066 CCDC187A0A096LP49 1063 aa6.97□□□□□ -1.29
CRNDE-202ENST00000502066 CASTOR2A6NHX0 329 aa6.97□□□□□ -1.29
CRNDE-202ENST00000502066 IPO5O00410 1097 aaKnown RBP6.97□□□□□ -1.29
CRNDE-202ENST00000502066 TRIM38O00635 465 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms