RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MAGED2Q9UNF1 606 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-204ENST00000501271 WASF2Q9Y6W5 498 aa10.09□□□□□ -0.79
CLIP1-204ENST00000501271 MYLKQ15746 1914 aa10.09□□□□□ -0.79
CLIP1-204ENST00000501271 C17orf102A2RUQ5 167 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 C9IYK1 514 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 NVLO15381 856 aaKnown RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SMNDC1O75940 238 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 TM7SF2O76062 418 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 FBXO21O94952 628 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ACADSP16219 412 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 AOC1P19801 751 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GCKP35557 465 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 VHLP40337 213 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ERFP50548 548 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CLCNKBP51801 687 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 AIF1P55008 147 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GJA9P57773 515 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SLC34A1Q06495 639 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 TBCCQ15814 346 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 INSCQ1MX18 579 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 MUM1Q2TAK8 710 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 RAB41Q5JT25 222 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 MORN1Q5T089 497 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GRTP1Q5TC63 336 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ANO7Q6IWH7 933 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 LRRC74BQ6ZQY2 392 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 STRA8Q7Z7C7 330 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 TMEM135Q86UB9 458 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SCUBE1Q8IWY4 988 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ULK2Q8IYT8 1036 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CFAP61Q8NHU2 1237 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SHKBP1Q8TBC3 707 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 STMN2Q93045 179 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ISL2Q96A47 359 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 MFSD3Q96ES6 412 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 PANX3Q96QZ0 392 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 APOL2Q9BQE5 337 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SIKE1Q9BRV8 207 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 THTPAQ9BU02 230 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CAB39LQ9H9S4 337 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 STX18Q9P2W9 335 aaKnown RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 UNCXA6NJT0 531 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 HHLA1C9JL84 531 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 LTFP02788 710 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 C6orf222P0C671 652 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CYP2B6P20813 491 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CPOXP36551 454 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GARSP41250 739 aaKnown RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 LIMK2P53671 638 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 IRF9Q00978 393 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 ITGA9Q13797 1035 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 DLG2Q15700 870 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 TSNAXIP1Q2TAA8 658 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CERCAMQ5T4B2 595 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 VWA5B1Q5TIE3 1220 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 FSTL4Q6MZW2 842 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 TNS4Q8IZW8 715 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 DNAAF3Q8N9W5 541 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 EDEM1Q92611 657 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 LPPQ93052 612 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 HDAC11Q96DB2 347 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GAD1Q99259 594 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 OXCT2Q9BYC2 517 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GBA3Q9H227 469 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 CNGB3Q9NQW8 809 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 SLC7A8Q9UHI5 535 aa10.08□□□□□ -0.8
CLIP1-204ENST00000501271 COL4A4P53420 1690 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-204ENST00000501271 GLTPD2A6NH11 291 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 ZNF195O14628 629 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 LIN7AO14910 233 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-204ENST00000501271 ATP9BO43861 1147 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 SIN3BO75182 1162 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 SKAP2O75563 359 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-204ENST00000501271 USP1O94782 785 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 RALBP11234 206 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 NFKB1P19838 968 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 HOXC8P31273 242 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 IDH3AP50213 366 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 CPT1AP50416 773 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 SERPINB8P50452 374 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 ABCE1P61221 599 aaKnown RBP10.07□□□□□ -0.8
CLIP1-204ENST00000501271 MXRA7P84157 204 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 GALNT2Q10471 571 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 MAP2K5Q13163 448 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 DNAL1Q4LDG9 190 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 ANKRD20A4Q4UJ75 823 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 HSP90AA5PQ58FG0 334 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 SPRYD7Q5W111 196 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-204ENST00000501271 NET1Q7Z628 596 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-204ENST00000501271 RSPH3Q86UC2 560 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 POU5F2Q8N7G0 328 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 ACVR1CQ8NER5 493 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 OR6Y1Q8NGX8 325 aa10.07□□□□□ -0.8
CLIP1-204ENST00000501271 PPP4R1Q8TF05 950 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms