RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 TRAPPC12Q8WVT3 735 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 TBC1D20Q96BZ9 403 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 EID2BQ96D98 161 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 MCRS1Q96EZ8 462 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 MED30Q96HR3 178 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 PAGR1Q9BTK6 254 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 TMEM120AQ9BXJ8 343 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 ZCWPW1Q9H0M4 648 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 TP63Q9H3D4 680 aaPredicted RBP2.74□□□□□ -1.97
RBM39-242ENST00000498280 PAPOLBQ9NRJ5 636 aaKnown RBP2.74□□□□□ -1.97
RBM39-242ENST00000498280 HELLSQ9NRZ9 838 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 NCKIPSDQ9NZQ3 722 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 LUZP4Q9P127 313 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 UTS2RQ9UKP6 389 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 GPR52Q9Y2T5 361 aa2.74□□□□□ -1.97
RBM39-242ENST00000498280 KIR2DS5A0A0G2JLQ3 304 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 KIR2DS3K7RE56 304 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 M0QZQ0 153 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 RPP40O75818 363 aaKnown RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 ACTL6BO94805 426 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 CAMTA2O94983 1202 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 PAPSS2O95340 614 aaPredicted RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 CER1O95813 267 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 ITGA2BP08514 1039 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 ALADP13716 330 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 HOXD12P35452 270 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 PDLIM4P50479 330 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 RPL36AP83881 106 aaKnown RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 FOXO1Q12778 655 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 BFSP2Q13515 415 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 KEAP1Q14145 624 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 CNGA3Q16281 694 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A2PQ658T7 463 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 TANGO2Q6ICL3 276 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 MSANTD2Q6P1R3 559 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 KLHL17Q6TDP4 642 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 CTU1Q7Z7A3 348 aaKnown RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 RHPN2Q8IUC4 686 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 SLC44A2Q8IWA5 706 aaPredicted RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 IQCF1Q8N6M8 205 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 NGDNQ8NEJ9 315 aaKnown RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 TMEM174Q8WUU8 243 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 NUDT22Q9BRQ3 303 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 RTKNQ9BST9 563 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 CINPQ9BW66 212 aaPredicted RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 ITM2CQ9NQX7 267 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 HERC5Q9UII4 1024 aaKnown RBP2.73□□□□□ -1.97
RBM39-242ENST00000498280 ICAM5Q9UMF0 924 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 PCDHB7Q9Y5E2 793 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 DGKBQ9Y6T7 804 aa2.73□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A18PA6NE21 464 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A16PA6NEW6 464 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 HMX3A6NHT5 357 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A9PA6NNJ1 464 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A5PA8MXJ8 464 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 KIF28PB7ZC32 967 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 M0QYT0 321 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 CREB3O43889 395 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 ZC3H11AO75152 810 aaKnown RBP eCLIP2.72□□□□□ -1.97
RBM39-242ENST00000498280 PPP6R2O75170 966 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 PLGP00747 810 aaPredicted RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A15PP0C7V4 464 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 FAM90A14PP0C7W9 464 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 DHRS4L1P0CG22 281 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 PEPDP12955 493 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 NDUFS1P28331 727 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 GSTM5P46439 218 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 RFX5P48382 616 aaPredicted RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 PPM1FP49593 454 aaPredicted RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 AGTR2P50052 363 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 PRKAA2P54646 552 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 SLC12A2P55011 1212 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 RRP1P56182 461 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 AP2B1P63010 937 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 SEMA3BQ13214 749 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 CSHL1Q14406 222 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 KCNJ12Q14500 433 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 SLC4A8Q2Y0W8 1093 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 TMEM95Q3KNT9 176 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 CCDC144NLQ6NUI1 221 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 RRAGAQ7L523 313 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 TTC30AQ86WT1 665 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 GPSM1Q86YR5 675 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 CCDC117Q8IWD4 279 aaPredicted RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 NRSN1Q8IZ57 195 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 CLASRPQ8N2M8 674 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 GALNT15Q8N3T1 639 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 OTUD7AQ8TE49 926 aaPredicted RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 SLC22A17Q8WUG5 538 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 RUBCNQ92622 972 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 AKAP1Q92667 903 aaKnown RBP eCLIP2.72□□□□□ -1.97
RBM39-242ENST00000498280 RILPL2Q969X0 211 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 SCLT1Q96NL6 688 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 EIF3CQ99613 913 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 NTPCRQ9BSD7 190 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 FAM167BQ9BTA0 163 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 ISCA1Q9BUE6 129 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 MECRQ9BV79 373 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms