RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 CDR1P51861 262 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 ARPP19P56211 112 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 KRT17Q04695 432 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 NME3Q13232 169 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 MTA1Q13330 715 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 XRCC4Q13426 336 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 SNX1Q13596 522 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 DPYSQ14117 519 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 CASP8Q14790 479 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 PPP1R7Q15435 360 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 TRADDQ15628 312 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 MGAT5BQ3V5L5 792 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 SPDYCQ5MJ68 293 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 ACBD5Q5T8D3 534 aaPredicted RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 RASIP1Q5U651 963 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 SNX30Q5VWJ9 437 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 FAM117BQ6P1L5 589 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 ZDHHC24Q6UX98 284 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 TMCO2Q7Z6W1 182 aaPredicted RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 TAC4Q86UU9 113 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 HERC6Q8IVU3 1022 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 TTC9BQ8N6N2 239 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 BEND7Q8N7W2 519 aaPredicted RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 RNF139Q8WU17 664 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 IFT81Q8WYA0 676 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 P3H4Q92791 437 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 ART4Q93070 314 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 RTP4Q96DX8 246 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 MYRFLQ96LU7 910 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 SERPINB11Q96P15 392 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 HHIPQ96QV1 700 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 HAPLN3Q96S86 360 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 CDK5RAP1Q96SZ6 601 aaKnown RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 HTATIP2Q9BUP3 242 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 TGIF2Q9GZN2 237 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 TSPYL1Q9H0U9 437 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 WDCPQ9H6R7 721 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 FAM204AQ9H8W3 233 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 NMUR1Q9HB89 426 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 PCDH9Q9HC56 1237 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 TLR8Q9NR97 1041 aaKnown RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 GPATCH2LQ9NWQ4 482 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 ARHGEF38Q9NXL2 777 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 FAM53CQ9NYF3 392 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.91□□□□□ -1.149e-7■■■■□ 20.1
CDC42-205ENST00000498236 CWC15Q9P013 229 aaKnown RBP7.91□□□□□ -1.14
CDC42-205ENST00000498236 LZTS1Q9Y250 596 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 RAD54BQ9Y620 910 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 PTPRSQ13332 1948 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 ALPK3Q96L96 1907 aa7.91□□□□□ -1.14
CDC42-205ENST00000498236 A0A096LPE4 126 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 A0A1W2PPZ6 126 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 A0A1W2PQH9 124 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 CFAP69A5D8W1 941 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 SLC38A8A6NNN8 435 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 KCNU1A8MYU2 1149 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 I6L893 689 aaPredicted RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 TP73O15350 636 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 FGF18O76093 207 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 C1RP00736 705 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 CTSAP10619 480 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 RBP3P10745 1247 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 PECAM1P16284 738 aaPredicted RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 ATF6P18850 670 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 ITPKAP23677 461 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 HOXC13P31276 330 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 CCR1P32246 355 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 HSPA9P38646 679 aaKnown RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 GRIA4P48058 902 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 PGFP49763 221 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 KPNA1P52294 538 aaPredicted RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 EIF3EP60228 445 aaKnown RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 DYNLT1P63172 113 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 CALCOCO2Q13137 446 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 HLTFQ14527 1009 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDC42-205ENST00000498236 SPRED3Q2MJR0 410 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 PPP6R3Q5H9R7 873 aaPredicted RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 KLHDC10Q6PID8 442 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 RHBDF2Q6PJF5 856 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 RFX8Q6ZV50 586 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 BZW1Q7L1Q6 419 aaKnown RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 DDX42Q86XP3 938 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDC42-205ENST00000498236 TCEAL8Q8IYN2 117 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 C7orf61Q8IZ16 206 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 VPS52Q8N1B4 723 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 MICALL1Q8N3F8 863 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 PDZD8Q8NEN9 1154 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 CASP10Q92851 521 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 FBXO32Q969P5 355 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 PLD4Q96BZ4 506 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 LRRC45Q96CN5 670 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 TRMT2BQ96GJ1 504 aaKnown RBP7.9□□□□□ -1.14
CDC42-205ENST00000498236 SNF8Q96H20 258 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 SLC39A13Q96H72 371 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 PKNOX2Q96KN3 472 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 C1orf74Q96LT6 269 aa7.9□□□□□ -1.14
CDC42-205ENST00000498236 CCDC114Q96M63 670 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms