RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CKMT1AP12532 417 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 GALNSP34059 522 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 JAK3P52333 1124 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 DNASE1L3Q13609 305 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 AAK1Q2M2I8 961 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 TRIM60Q495X7 471 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 LRRC24Q50LG9 513 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 TMEM63BQ5T3F8 832 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 C16orf89Q6UX73 402 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 SFTPA1Q8IWL2 248 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 C12orf76Q8N812 135 aaPredicted RBP3.68□□□□□ -1.82
PHC3-216ENST00000497171 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.68□□□□□ -1.82
PHC3-216ENST00000497171 SPPL3Q8TCT6 385 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 ZNF398Q8TD17 642 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 MAP4K1Q92918 833 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 USP13Q92995 863 aaPredicted RBP3.68□□□□□ -1.82
PHC3-216ENST00000497171 FAM84BQ96KN1 310 aaPredicted RBP3.68□□□□□ -1.82
PHC3-216ENST00000497171 NOD2Q9HC29 1040 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 IFT80Q9P2H3 777 aaPredicted RBP3.68□□□□□ -1.82
PHC3-216ENST00000497171 PCDHA10Q9Y5I2 948 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 LOC105369274A0A096LPK9 316 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 LOC102723532A0A0G2JNH3 316 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 TCRBV5S1A1TA0A578 114 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 M0QZQ0 153 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 FYB1O15117 783 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 CNOT3O75175 753 aaKnown RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 TK1P04183 234 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 CPA1P15085 419 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 PCP4P48539 62 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 FAM3BP58499 235 aaPredicted RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 RAE1P78406 368 aaKnown RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 MFSD13AQ14CX5 517 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 DLGAP5Q15398 846 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 FAM110CQ1W6H9 321 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 RNASE12Q5GAN4 147 aaKnown RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 DGAT2L7PQ6IED9 249 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 ACSM6Q6P461 480 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 TMEM65Q6PI78 240 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 RINLQ6ZS11 566 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 RFX6Q8HWS3 928 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 HERC6Q8IVU3 1022 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 C16orf71Q8IYS4 520 aaPredicted RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 OR4N4Q8N0Y3 316 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 MMP21Q8N119 569 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 PELI3Q8N2H9 469 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 FSIP1Q8NA03 581 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 MAFAQ8NHW3 353 aaPredicted RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 DNASE2BQ8WZ79 361 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 NPIPB3Q92617 1050 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 RBM17Q96I25 401 aaKnown RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 PAAF1Q9BRP4 392 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 ELOVL1Q9BW60 279 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 RMI1Q9H9A7 625 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 PRDM16Q9HAZ2 1276 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 GGA3Q9NZ52 723 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 ERRFI1Q9UJM3 462 aaPredicted RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 LZTS1Q9Y250 596 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 ZBTB1Q9Y2K1 713 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 CRYL1Q9Y2S2 319 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 DERAQ9Y315 318 aa3.67□□□□□ -1.82
PHC3-216ENST00000497171 HEMK1Q9Y5R4 338 aaPredicted RBP3.67□□□□□ -1.82
PHC3-216ENST00000497171 IGLV5-39A0A0G2JS06 123 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 TTC34A8MYJ7 566 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 STX16-NPEPL1H3BU86 382 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 STX16O14662 325 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 ACOT8O14734 319 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 NGFRP08138 427 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 CTSAP10619 480 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 XBP1P17861 261 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 CD53P19397 219 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 MATN1P21941 496 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 VPS41P49754 854 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 RCAN1P53805 252 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 RPL15P61313 204 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 WDR5P61964 334 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 RBM6P78332 1123 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 GPC5P78333 572 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 SMAD1Q15797 465 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 CNGA3Q16281 694 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 TBRG1Q3YBR2 411 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 SLC9C1Q4G0N8 1177 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 CC2D1BQ5T0F9 858 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 JAKMIP3Q5VZ66 844 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 WDR93Q6P2C0 686 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 BCDIN3DQ7Z5W3 292 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 LRRTM4Q86VH4 590 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 OR52L2PQ8NGH6 319 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 ASB12Q8WXK4 309 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 AKAP1Q92667 903 aaKnown RBP eCLIP3.66□□□□□ -1.82
PHC3-216ENST00000497171 STAMQ92783 540 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 KCNJ9Q92806 393 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 SDCCAG3Q96C92 435 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 MAELQ96JY0 434 aaKnown RBP3.66□□□□□ -1.82
PHC3-216ENST00000497171 TBATAQ96M53 351 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 PIGSQ96S52 555 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 PLEKHA2Q9HB19 425 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 G6PC2Q9NQR9 355 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 ABHD10Q9NUJ1 306 aa3.66□□□□□ -1.82
PHC3-216ENST00000497171 GXYLT2A0PJZ3 443 aa3.65□□□□□ -1.83
PHC3-216ENST00000497171 CLIC1O00299 241 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms