RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PITRM1Q5JRX3 1037 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 NADSYN1Q6IA69 706 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 STK40Q8N2I9 435 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 IRGQQ8WZA9 623 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 CCDC97Q96F63 343 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 ZNF396Q96N95 335 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 USP29Q9HBJ7 922 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 THSD1Q9NS62 852 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 SLCO3A1Q9UIG8 710 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 TSPAN16Q9UKR8 245 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
COL1A1-209ENST00000495677 USP12O75317 370 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 IL1BP01584 269 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 KRT13P13646 458 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 NNMTP40261 264 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 PSMD8P48556 350 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 TBX4P57082 545 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 NNTQ13423 1086 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 SLC12A1Q13621 1099 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 XKR5Q6UX68 686 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 CCDC117Q8IWD4 279 aaPredicted RBP13.9□□□□□ -0.18
COL1A1-209ENST00000495677 SEMA4DQ92854 862 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 IFT43Q96FT9 208 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 KLHDC7BQ96G42 594 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 PRICKLE1Q96MT3 831 aaPredicted RBP13.9□□□□□ -0.18
COL1A1-209ENST00000495677 SLC46A1Q96NT5 459 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 SPAG5Q96R06 1193 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 EXOC1Q9NV70 894 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 RAB20Q9NX57 234 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 STIM2Q9P246 746 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 HESX1Q9UBX0 185 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 TJP2Q9UDY2 1190 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 KIAA1257Q9ULG3 409 aa13.9□□□□□ -0.18
COL1A1-209ENST00000495677 PTPN13Q12923 2485 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 AHCTF1Q8WYP5 2266 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 LUC7L3O95232 432 aaKnown RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 MYL1P05976 194 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 TRIM49P0CI25 452 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 TRIM49CP0CI26 452 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 SETSIPP0DME0 302 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 NR2F2P24468 414 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 PSMC2P35998 433 aaKnown RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 CTSOP43234 321 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 DUSP3P51452 185 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 PLK1P53350 603 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 RPS24P62847 133 aaKnown RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 CDH18Q13634 790 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 SETMARQ53H47 684 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 MS4A13Q5J8X5 152 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 RESP18Q5W5W9 173 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 SIX6OS1Q8N1H7 587 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 CARNMT1Q8N4J0 409 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 FBXL13Q8NEE6 735 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 FAM174AQ8TBP5 190 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 SLC35F5Q8WV83 523 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 TATDN2Q93075 761 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 SLC39A13Q96H72 371 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 UPF2Q9HAU5 1272 aaKnown RBP13.89□□□□□ -0.19
COL1A1-209ENST00000495677 PCDHGA8Q9Y5G5 932 aa13.89□□□□□ -0.19
COL1A1-209ENST00000495677 DOPEY2Q9Y3R5 2298 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 A0A1B0GVM2 712 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 NEMP2A6NFY4 417 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 SLC28A2O43868 658 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 SDC3O75056 442 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 CSO75390 466 aaKnown RBP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 PIAS2O75928 621 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 VDRP11473 427 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 RPL13P26373 211 aaKnown RBP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 MLLT3P42568 568 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 SULT2A1Q06520 285 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 SRSF1Q07955 248 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 KCNMA1Q12791 1236 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 ISXQ2M1V0 245 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 GOLGA7BQ2TAP0 167 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 FAM46CQ5VWP2 391 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 RNF219Q5W0B1 726 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 CEP57L1Q8IYX8 460 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 APCDD1Q8J025 514 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 FRS2Q8WU20 508 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 MYEOVQ96EZ4 313 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 VCPIP1Q96JH7 1222 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 RPL10LQ96L21 214 aaKnown RBP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 FCRL2Q96LA5 508 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-209ENST00000495677 APOLD1Q96LR9 279 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 DUSP23Q9BVJ7 150 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 PREBQ9HCU5 417 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 EVA1BQ9NVM1 165 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 NLGN3Q9NZ94 848 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 IL17BQ9UHF5 180 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 TLR6Q9Y2C9 796 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 SCN8AQ9UQD0 1980 aa13.88□□□□□ -0.19
COL1A1-209ENST00000495677 LY6G6EA0A0G2JKS1 128 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 CDRT15L2A8MXV6 281 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms