RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 DRGXA6NNA5 263 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 MEI4A8MW99 385 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 GIPC1O14908 333 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 RNASEH1O60930 286 aaKnown RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 CLDN11O75508 207 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 CNTN5O94779 1100 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 SYPP08247 313 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 ATP1A3P13637 1013 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 MMP8P22894 467 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 GGCXP38435 758 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 NNMTP40261 264 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 STK19P49842 368 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 ATXN3P54252 364 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 SULT2A1Q06520 285 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 SH3PXD2AQ5TCZ1 1133 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 RNF219Q5W0B1 726 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 ZNF776Q68DI1 518 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 PSAPL1Q6NUJ1 521 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 ARCQ7LC44 396 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 CFAP57Q96MR6 1250 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 BTBD1Q9H0C5 482 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 MIR1-1HGQ9H1L0 117 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 C6orf106Q9H6K1 298 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 TMPRSS4Q9NRS4 437 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 SUSD2Q9UGT4 822 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 EIF2B4Q9UI10 523 aaKnown RBP16.07■□□□□ 0.16
LIMS2-216ENST00000494613 NCKAP1Q9Y2A7 1128 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 TBC1D30Q9Y2I9 924 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 OR51B4Q9Y5P0 310 aa16.07■□□□□ 0.16
LIMS2-216ENST00000494613 CKAP5Q14008 2032 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 TNRC6BQ9UPQ9 1833 aaKnown RBP16.06■□□□□ 0.16
LIMS2-216ENST00000494613 EDDM13A0A1B0GTR0 161 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 A0A1B0GTW7 788 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 ENDOD1O94919 500 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 UNGP13051 313 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-216ENST00000494613 CEACAM1P13688 526 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 SLC8A1P32418 973 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 CDH4P55283 916 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 ANO6Q4KMQ2 910 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 BNIPLQ7Z465 357 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 MMAAQ8IVH4 418 aaKnown RBP16.06■□□□□ 0.16
LIMS2-216ENST00000494613 ZNF683Q8IZ20 524 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 OR2I1PQ8NGU4 316 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 C1orf216Q8TAB5 229 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 GANCQ8TET4 914 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 HAPLN3Q96S86 360 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
LIMS2-216ENST00000494613 PCED1AQ9H1Q7 454 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 NEUROG2Q9H2A3 272 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 FBXL12Q9NXK8 326 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 PAXBP1Q9Y5B6 917 aa16.06■□□□□ 0.16
LIMS2-216ENST00000494613 ITIH6Q6UXX5 1313 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 BCAT2O15382 392 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-216ENST00000494613 TEX33O43247 280 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 SEMA4FO95754 770 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 CSRP1P21291 193 aaKnown RBP16.05■□□□□ 0.16
LIMS2-216ENST00000494613 VASPP50552 380 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-216ENST00000494613 NOVA1P51513 510 aaKnown RBP16.05■□□□□ 0.16
LIMS2-216ENST00000494613 PTP4A2Q12974 167 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 SEMA3BQ13214 749 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 CST6Q15828 149 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 ALFQ53S48 1182 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 ARTNQ5T4W7 220 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 LRRC31Q6UY01 552 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 TRIM72Q6ZMU5 477 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 USP30Q70CQ3 517 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 MINDY1Q8N5J2 469 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 EMC1Q8N766 993 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 FRS2Q8WU20 508 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 RXFP2Q8WXD0 754 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 PABPC3Q9H361 631 aaKnown RBP16.05■□□□□ 0.16
LIMS2-216ENST00000494613 SGK2Q9HBY8 427 aa16.05■□□□□ 0.16
LIMS2-216ENST00000494613 CNOT1A5YKK6 2376 aaKnown RBP16.05■□□□□ 0.16
LIMS2-216ENST00000494613 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 MID1O15344 667 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 OPHN1O60890 802 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 VAV1P15498 845 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 GALCP54803 685 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 ATP11AP98196 1134 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 SFSWAPQ12872 951 aaKnown RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 CCDC14Q49A88 953 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 ACCSLQ4AC99 568 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 RAB6CQ53S08 254 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 ACBD5Q5T8D3 534 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 PIP4P1Q86T03 277 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 HDDC3Q8N4P3 179 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 ZCCHC9Q8N567 271 aaKnown RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 DEFB124Q8NES8 71 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 BIRC7Q96CA5 298 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 BPIFA3Q9BQP9 254 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 RAB6CQ9H0N0 254 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 DNAAF2Q9NVR5 837 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms