RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SCML4Q8N228 414 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 AADATQ8N5Z0 425 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 MYO19Q96H55 970 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 MRGPRX3Q96LB0 322 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 GSDMAQ96QA5 445 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 MYOCQ99972 504 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 TRIM62Q9BVG3 475 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 GTPBP4Q9BZE4 634 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 SLC12A6Q9UHW9 1150 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 SLC25A13Q9UJS0 675 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 INTS6Q9UL03 887 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 FZD4Q9ULV1 537 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 CTNND2Q9UQB3 1225 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 BPTFQ12830 3046 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 E5RJQ4 531 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 TLR4O00206 839 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 WNT9AO14904 365 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 YKT6O15498 198 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 RRP8O43159 456 aaKnown RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 MED7O43513 233 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 RTN2O75298 545 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 GABBR2O75899 941 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 MZF1P28698 734 aaPredicted RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 EPHA8P29322 1005 aaPredicted RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 ACADSBP45954 432 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 PPP2CBP62714 309 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 PPP2CAP67775 309 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 DAB2P98082 770 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 TARDBPQ13148 414 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBR4-216ENST00000494503 KCNJ12Q14500 433 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 ELAVL3Q14576 367 aaKnown RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 STAT4Q14765 748 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 RABGAP1LQ5R372 815 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 SYPL2Q5VXT5 272 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 DENND1BQ6P3S1 775 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 DSG4Q86SJ6 1040 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 UBR7Q8N806 425 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 ATP6V0D2Q8N8Y2 350 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 OR8D1Q8WZ84 308 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 AZIN2Q96A70 460 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 BTN2A3PQ96KV6 586 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 BBC3Q96PG8 261 aaPredicted RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 ZSWIM1Q9BR11 485 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 ORAI3Q9BRQ5 295 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 IRX2Q9BZI1 471 aaPredicted RBP9.94□□□□□ -0.82
UBR4-216ENST00000494503 EBF2Q9HAK2 575 aa9.94□□□□□ -0.82
UBR4-216ENST00000494503 COL5A1P20908 1838 aaPredicted RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 ITIH6Q6UXX5 1313 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 C1QTNF3-AMACRE9PGA6 284 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 BIN1O00499 593 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 GRAP2O75791 330 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 DKK1O94907 266 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 ZIC2O95409 532 aaPredicted RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 TRUB2O95900 331 aaKnown RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 PRB1P04280 392 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 ITPKBP27987 946 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 GNA15P30679 374 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 GGCXP38435 758 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 CCR5P51681 352 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 STX17P56962 302 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 CENPCQ03188 943 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 SULT2A1Q06520 285 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 BNIP3Q12983 259 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 NME3Q13232 169 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 CAMK2BQ13554 666 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 FAM46CQ5VWP2 391 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 NAPEPLDQ6IQ20 393 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 PASD1Q8IV76 773 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 FMR1NBQ8N0W7 255 aaPredicted RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 OXR1Q8N573 874 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 SAP25Q8TEE9 199 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 NELFBQ8WX92 580 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 BAP1Q92560 729 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 LMLNQ96KR4 655 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 CEP63Q96MT8 703 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 SPAG5Q96R06 1193 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 MED15Q96RN5 788 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 INTS2Q9H0H0 1204 aaKnown RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 MUC3BQ9H195 1237 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 SYNCQ9H7C4 482 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 POPDC2Q9HBU9 364 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 UBE2TQ9NPD8 197 aaPredicted RBP9.93□□□□□ -0.82
UBR4-216ENST00000494503 DDIT4Q9NX09 232 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 DKK4Q9UBT3 224 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 ADAMTS1Q9UHI8 967 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 VPS28Q9UK41 221 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 CA5BQ9Y2D0 317 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 PCDHGA1Q9Y5H4 931 aa9.93□□□□□ -0.82
UBR4-216ENST00000494503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.93□□□□□ -0.82
UBR4-216ENST00000494503 ARID1BQ8NFD5 2236 aaPredicted RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 SMG1Q96Q15 3661 aaKnown RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 BICDL2A1A5D9 508 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 FFAR2O15552 330 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 MAGEC1O60732 1142 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 AFPP02771 609 aaKnown RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 FYNP06241 537 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms