RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 FNDC1Q4ZHG4 1894 aaPredicted RBP6.69□□□□□ -1.34
SMC2-205ENST00000493955 CNTN5O94779 1100 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 HOXD12P35452 270 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 MTFR2Q6P444 385 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 BCDIN3DQ7Z5W3 292 aaKnown RBP6.68□□□□□ -1.34
SMC2-205ENST00000493955 VPS52Q8N1B4 723 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 TBC1D5Q92609 795 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 ZNF845Q96IR2 970 aaPredicted RBP6.68□□□□□ -1.34
SMC2-205ENST00000493955 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 COQ10AQ96MF6 247 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 CLSTN3Q9BQT9 956 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMC2-205ENST00000493955 NPLQ9BXD5 320 aaPredicted RBP6.68□□□□□ -1.34
SMC2-205ENST00000493955 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 CCDC68Q9H2F9 335 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 GHITMQ9H3K2 345 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 TTC12Q9H892 705 aaPredicted RBP6.68□□□□□ -1.34
SMC2-205ENST00000493955 SMYD2Q9NRG4 433 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 HAUS2Q9NVX0 235 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 ASNSD1Q9NWL6 643 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 VPS28Q9UK41 221 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 PIAS3Q9Y6X2 628 aa6.68□□□□□ -1.34
SMC2-205ENST00000493955 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 NPIPB15A6NHN6 443 aaPredicted RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 TEX22C9J3V5 150 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 GCOM1H8Y6P7 765 aaPredicted RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 CLIC1O00299 241 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 PER2O15055 1255 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 TMCC2O75069 709 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 MT-CO3P00414 261 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 LAMP2P13473 410 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 PKMP14618 531 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 ALOX12P18054 663 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 MLH1P40692 756 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 RGS2P41220 211 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 RAD52P43351 418 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 AVPR1BP47901 424 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 OAZ1P54368 228 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 DGCR2P98153 550 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 MAMLD1Q13495 774 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 DCTN2Q13561 401 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 GLE1Q53GS7 698 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 BRSK2Q8IWQ3 736 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 TERB1Q8NA31 727 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 LINC00476Q8WZB0 136 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 CNOT9Q92600 299 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 ATP2A3Q93084 1043 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 C5orf34Q96MH7 638 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 ITPAQ9BY32 194 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 TRIM2Q9C040 744 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 EPHX3Q9H6B9 360 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 SYBUQ9NX95 663 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 TBC1D29Q9UFV1 150 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 PKP3Q9Y446 797 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 TTLL3Q9Y4R7 772 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 PSAT1Q9Y617 370 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 SIRT4Q9Y6E7 314 aaPredicted RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 DSCR3O14972 297 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 ZNF500O60304 480 aaPredicted RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 URODP06132 367 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 ELFN1P0C7U0 828 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 DRD4P21917 467 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 GSTM2P28161 218 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 MAPK4P31152 587 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 VPS41P49754 854 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 RPS3AP61247 264 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 CYP4F2P78329 520 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 DMWDQ09019 674 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 KCNB1Q14721 858 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 AP5B1Q2VPB7 878 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 UBAP2Q5T6F2 1119 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 GJB7Q6PEY0 223 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 Q6YL49 198 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 DCDC5Q6ZRR9 648 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 TTLL10Q6ZVT0 673 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 SLC29A4Q7RTT9 530 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 OR8H2Q8N162 312 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 C2CD4CQ8TF44 421 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 RAB40AQ8WXH6 277 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 SAAL1Q96ER3 474 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 HIC2Q96JB3 615 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 RANBP17Q9H2T7 1088 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 PRKRIP1Q9H875 184 aaPredicted RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 EIF2B3Q9NR50 452 aaKnown RBP6.67□□□□□ -1.34
SMC2-205ENST00000493955 ASIC5Q9NY37 505 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 ST3GAL5Q9UNP4 418 aa6.67□□□□□ -1.34
SMC2-205ENST00000493955 GTPBP1O00178 669 aaKnown RBP6.66□□□□□ -1.34
SMC2-205ENST00000493955 AP3D1O14617 1153 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 AHCYL1O43865 530 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 HBP1O60381 514 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 EXOC3O60645 756 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 CCNDBP1O95273 360 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 ESRRBO95718 433 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 MLYCDO95822 493 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 ADH4P08319 380 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 HOXB9P17482 250 aaPredicted RBP6.66□□□□□ -1.34
SMC2-205ENST00000493955 ABCD1P33897 745 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 HOXD13P35453 343 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 GJC1P36383 396 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 MPLP40238 635 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms