RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 APOC4-APOC2K7ER74 178 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 PGRMC1O00264 195 aaKnown RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 TIMM44O43615 452 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 CEP104O60308 925 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 CST8O60676 142 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 APOC2P02655 101 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 ASLP04424 464 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 PABPC1P11940 636 aaKnown RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 CTHP32929 405 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 NNMTP40261 264 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 TNK2Q07912 1038 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
ACTB-213ENST00000493945 MLF2Q15773 248 aaPredicted RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 DNTTIP2Q5QJE6 756 aaKnown RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 FAM72AQ5TYM5 149 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 FAM72DQ6L9T8 149 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 TIGD7Q6NT04 549 aaPredicted RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 RETSATQ6NUM9 610 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 BBS12Q6ZW61 710 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 NLRP14Q86W24 1093 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 FAM72BQ86X60 149 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 BBS5Q8N3I7 341 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 ST13P5Q8NFI4 369 aaPredicted RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 ACDQ96AP0 544 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 OSBPL9Q96SU4 736 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 P2RY13Q9BPV8 354 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.31■□□□□ 0.04
ACTB-213ENST00000493945 WNT16Q9UBV4 365 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 SLC25A13Q9UJS0 675 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 GGA2Q9UJY4 613 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 VPS28Q9UK41 221 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 CXorf51AA0A1B0GTR3 108 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 MCF2LO15068 1137 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 DCLK1O15075 740 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 NPC1O15118 1278 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 TULP3O75386 442 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 NEBLO76041 1014 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 CD48P09326 243 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 PYGMP11217 842 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 POLR2EP19388 210 aaKnown RBP15.3■□□□□ 0.04
ACTB-213ENST00000493945 DRD1P21728 446 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 AMPD1P23109 780 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 GRIA2P42262 883 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 DYNLT1P63172 113 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 GNA12Q03113 381 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
ACTB-213ENST00000493945 MMRN1Q13201 1228 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
ACTB-213ENST00000493945 PDK1Q15118 436 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 TAZQ16635 292 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 FBXO43Q4G163 708 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 ALFQ53S48 1182 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 MIA3Q5JRA6 1907 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 TMCO4Q5TGY1 634 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 PAPD7Q5XG87 772 aaKnown RBP15.3■□□□□ 0.04
ACTB-213ENST00000493945 SLC9A4Q6AI14 798 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 IL31Q6EBC2 164 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 ZNF852Q6ZMS4 543 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 CIR1Q86X95 450 aaPredicted RBP15.3■□□□□ 0.04
ACTB-213ENST00000493945 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.3■□□□□ 0.041e-23■□□□□ 9.6
ACTB-213ENST00000493945 DCAF4L2Q8NA75 395 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 WDR24Q96S15 920 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 UHRF1Q96T88 793 aaPredicted RBP15.3■□□□□ 0.04
ACTB-213ENST00000493945 PSMB7Q99436 277 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 SP110Q9HB58 689 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 ATP13A1Q9HD20 1204 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 ARHGEF3Q9NR81 526 aa15.3■□□□□ 0.04
ACTB-213ENST00000493945 TBC1D3BA6NDS4 549 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 C3orf70A6NLC5 250 aaPredicted RBP15.29■□□□□ 0.04
ACTB-213ENST00000493945 MTSS1O43312 755 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 CNTN5O94779 1100 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
ACTB-213ENST00000493945 SGSHP51688 502 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 ST8SIA6P61647 398 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 ZNF211Q13398 564 aaPredicted RBP15.29■□□□□ 0.04
ACTB-213ENST00000493945 LRRC32Q14392 662 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 LONRF2Q1L5Z9 754 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 SLC44A4Q53GD3 710 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 NCBP2-AS2Q69YL0 99 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 TPRG1Q6ZUI0 275 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 TRMT11Q7Z4G4 463 aaKnown RBP15.29■□□□□ 0.04
ACTB-213ENST00000493945 SLC13A5Q86YT5 568 aaPredicted RBP15.29■□□□□ 0.04
ACTB-213ENST00000493945 NAT16Q8N8M0 369 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 TERB1Q8NA31 727 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 PCDH19Q8TAB3 1148 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 CASKIN2Q8WXE0 1202 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 NELL2Q99435 816 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 HEBP1Q9NRV9 189 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 ABCB8Q9NUT2 735 aa15.29■□□□□ 0.04
ACTB-213ENST00000493945 TTC7AQ9ULT0 858 aaPredicted RBP15.29■□□□□ 0.04
ACTB-213ENST00000493945 NEU3Q9UQ49 428 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms