RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 RPSAP08865 295 aaKnown RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 GSTA2P09210 222 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 TYRP14679 529 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 GABRG2P18507 467 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 CASP14P31944 242 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 GTF2H1P32780 548 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 ATP5C1P36542 298 aaKnown RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 EIF2DP41214 584 aaKnown RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 DHPSP49366 369 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 ADKP55263 362 aaKnown RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 EFEMP1Q12805 493 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 GOLGA7BQ2TAP0 167 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 DCAF17Q5H9S7 520 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 RAB41Q5JT25 222 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 N4BP2L1Q5TBK1 243 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 RAD9BQ6WBX8 426 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 PIGZQ86VD9 579 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 LCA5Q86VQ0 697 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 FBXL13Q8NEE6 735 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 UBA3Q8TBC4 463 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 TFAP2BQ92481 460 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 SLC35C1Q96A29 364 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 IQCDQ96DY2 449 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 TMEM176AQ96HP8 235 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 GDAP1L1Q96MZ0 367 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 CCDC28BQ9BUN5 200 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 BBS2Q9BXC9 721 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 NACA2Q9H009 215 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 VCX3BQ9H321 246 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 FBXO44Q9H4M3 255 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 VCX3AQ9NNX9 186 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 CACNA2D2Q9NY47 1150 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 MARK1Q9P0L2 795 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 DEC1Q9P2X7 70 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 RASAL2Q9UJF2 1139 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 MAN1B1Q9UKM7 699 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 BLOC1S6Q9UL45 172 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 TMCO1Q9UM00 188 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 COQ4Q9Y3A0 265 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 PCDHGA5Q9Y5G8 931 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
HDAC6-234ENST00000493923 CKAP5Q14008 2032 aa8.46□□□□□ -1.05
HDAC6-234ENST00000493923 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.05
HDAC6-234ENST00000493923 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 E7EVH7 732 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 PIK3R2O00459 728 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 CDX4O14627 284 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ZSCAN9O15535 394 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 CACNG3O60359 315 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 KRT37O76014 449 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ANP32DO95626 131 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 TOP3BO95985 862 aaKnown RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 NDUFV2P19404 249 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 RPL13P26373 211 aaKnown RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 RANBP1P43487 201 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 LIMK1P53667 647 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 IRX4P78413 519 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 MXRA7P84157 204 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 DEUP1Q05D60 604 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ENPEPQ07075 957 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 CUL2Q13617 745 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 GEN1Q17RS7 908 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 USP39Q53GS9 565 aaKnown RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 COBLL1Q53SF7 1204 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 TTMPQ5BVD1 217 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ARSIQ5FYB1 569 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF658Q5TYW1 1059 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 AGBL2Q5U5Z8 902 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 TCERG1LQ5VWI1 586 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 FYB2Q5VWT5 728 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ARHGAP17Q68EM7 881 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 GRAMD4Q6IC98 578 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 SLC41A1Q8IVJ1 513 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ARHGEF19Q8IW93 802 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 FAM114A1Q8IWE2 563 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 C12orf50Q8NA57 414 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 OR2I1PQ8NGU4 316 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ATL2Q8NHH9 583 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 LMO3Q8TAP4 145 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 SORCS1Q8WY21 1168 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 PIGKQ92643 395 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 CENPTQ96BT3 561 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 OTUB2Q96DC9 234 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 EDEM2Q9BV94 578 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 ULBP1Q9BZM6 244 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 IMPG2Q9BZV3 1241 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 YIPF3Q9GZM5 350 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 FAM192AQ9GZU8 254 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 NSRP1Q9H0G5 558 aaKnown RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 PNPLA8Q9NP80 782 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 VPS45Q9NRW7 570 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 CIDEBQ9UHD4 219 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 FBXO10Q9UK96 956 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms