RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CARSP49589 748 aaKnown RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 PRELPP51888 382 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 MTA1Q13330 715 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 CNGA3Q16281 694 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 PRTGQ2VWP7 1150 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 CCDC184Q52MB2 194 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 GRHL2Q6ISB3 625 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 RBM44Q6ZP01 1051 aaKnown RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 TFAP2DQ7Z6R9 452 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 SDR16C5Q8N3Y7 309 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 SLC44A5Q8NCS7 719 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 LRTOMTQ8WZ04 291 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 APIPQ96GX9 242 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 PRR11Q96HE9 360 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 MRPL44Q9H9J2 332 aaKnown RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 MLXIPLQ9NP71 852 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 MIS18AQ9NYP9 233 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 PROCRQ9UNN8 238 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 ZBTB1Q9Y2K1 713 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 RRP7AQ9Y3A4 280 aaKnown RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 KNSTRNQ9Y448 316 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 KIF24Q5T7B8 1368 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 TTC3P53804 2025 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 CASP8AP2Q9UKL3 1982 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 CLSPNQ9HAW4 1339 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 ARAP2Q8WZ64 1704 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 AK9Q5TCS8 1911 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 C16orf96A6NNT2 1141 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 LACTBL1A8MY62 500 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 ZNF814B7Z6K7 855 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 PRPF4O43172 522 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 ZC3H11AO75152 810 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 WDR47O94967 919 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 NDUFB8O95169 186 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 MMP10P09238 476 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 TBXAS1P24557 533 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 PRKAR2BP31323 418 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 CRKLP46109 303 aaKnown RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 DGKQP52824 942 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 IGBP1P78318 339 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 KRT24Q2M2I5 525 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 ARHGAP29Q52LW3 1261 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 RNF220Q5VTB9 566 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 OLFM4Q6UX06 510 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 RFX8Q6ZV50 586 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 MCM10Q7L590 875 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 SESTD1Q86VW0 696 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 UEVLDQ8IX04 471 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 CCDC146Q8IYE0 955 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 KRT78Q8N1N4 520 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 RBMXL3Q8N7X1 1067 aaKnown RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 MBD3L2Q8NHZ7 208 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 FAM227BQ96M60 508 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 TMEM204Q9BSN7 226 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 SAP30LQ9HAJ7 183 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 PAPOLBQ9NRJ5 636 aaKnown RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 MSRB1Q9NZV6 116 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 ZNF212Q9UDV6 495 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 NOB1Q9ULX3 412 aaKnown RBP3.7□□□□□ -1.82
PTCD3-218ENST00000493430 PCDHA12Q9UN75 941 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 COG5Q9UP83 839 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 MAP3K5Q99683 1374 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 DUOX1Q9NRD9 1551 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 AKAP11Q9UKA4 1901 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 SCN4AP35499 1836 aa3.7□□□□□ -1.82
PTCD3-218ENST00000493430 GOLGB1Q14789 3259 aaKnown RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 ADCY9O60503 1353 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 TRBV5-3A0A0A0MS03 114 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 A0A0G2JLW4 131 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 TMEM272A0A1B0GTI8 110 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 TTC34A8MYJ7 566 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 RNMTO43148 476 aaKnown RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 MGEA5O60502 916 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 EPN2O95208 641 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 DPEP1P16444 411 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 TFEBP19484 476 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 DUSP1P28562 367 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 HTR7P34969 479 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 VPS41P49754 854 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 PGGT1BP53609 377 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 RAE1P78406 368 aaKnown RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 RHDQ02161 417 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 MTAPQ13126 283 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 DDX10Q13206 875 aaKnown RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 POLD3Q15054 466 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 AASDHQ4L235 1098 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 ZNF585BQ52M93 769 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 CCDC149Q6ZUS6 474 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 IL17REQ8NFR9 667 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 B4GALNT2Q8NHY0 566 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 SUN3Q8TAQ9 357 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 MSLNLQ96KJ4 702 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 SELENOOQ9BVL4 669 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 RNF26Q9BY78 433 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 SLCO5A1Q9H2Y9 848 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms