RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FAM71AQ8IYT1 594 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CHCHD4Q8N4Q1 142 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 MYEOVQ96EZ4 313 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CAMK1GQ96NX5 476 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 FAM129BQ96TA1 746 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 NEUROG2Q9H2A3 272 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 WDCPQ9H6R7 721 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 XPO7Q9UIA9 1087 aaKnown RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 SLCO3A1Q9UIG8 710 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 SLC25A13Q9UJS0 675 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 SNX11Q9Y5W9 270 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CHD8Q9HCK8 2581 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CEP192Q8TEP8 1941 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 A0A1W2PP55 124 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 FAM47DPA6NHR8 397 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 M0QYT0 321 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 PCDHGA12O60330 932 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 DAB1O75553 588 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 IL1BP01584 269 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 IGHV4-34P06331 123 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 EEF1GP26641 437 aaKnown RBP12.83□□□□□ -0.36
COL6A1-205ENST00000492851 SCNN1AP37088 669 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 CCT8P50990 548 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 CDH4P55283 916 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 KRT83P78385 493 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 BNC1Q01954 994 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 NME3Q13232 169 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 C5orf22Q49AR2 442 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 FBXL22Q6P050 247 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 LRRC31Q6UY01 552 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 FAM183BPQ6ZVS7 135 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 SLC47A2Q86VL8 602 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 PTPRN2Q92932 1015 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 C18orf8Q96DM3 657 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.36
COL6A1-205ENST00000492851 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 FEM1AQ9BSK4 669 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 IL21RQ9HBE5 538 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 SIX2Q9NPC8 291 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL6A1-205ENST00000492851 COX16Q9P0S2 106 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 KLK13Q9UKR3 277 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
COL6A1-205ENST00000492851 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 C1QTNF3-AMACRE9PGA6 284 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 ALOX15BO15296 676 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 YKT6O15498 198 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TNFSF14O43557 240 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 MAGEC1O60732 1142 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 GRAP2O75791 330 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 LSM8O95777 96 aaKnown RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TPM2P07951 284 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CDK4P11802 303 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CYP11B1P15538 503 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 ZNF18P17022 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 MZF1P28698 734 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CD38P28907 300 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CDH5P33151 784 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CTSOP43234 321 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CTSKP43235 329 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 GABRB2P47870 512 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 ACCSLQ4AC99 568 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 PRPF39Q86UA1 669 aaKnown RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 ERICH1Q86X53 443 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 STK40Q8N2I9 435 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 OR14C36Q8NHC7 312 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 OR8D1Q8WZ84 308 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 PGAP3Q96FM1 320 aaPredicted RBP12.82□□□□□ -0.36
COL6A1-205ENST00000492851 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 NPY6RQ99463 290 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 NUP62CLQ9H1M0 184 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 VANGL2Q9ULK5 521 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 TBC1D30Q9Y2I9 924 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 HS3ST4Q9Y661 456 aa12.82□□□□□ -0.36
COL6A1-205ENST00000492851 PES1O00541 588 aaKnown RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 MCF2LO15068 1137 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ATP9BO43861 1147 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 PAGE1O75459 146 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ERBB2P04626 1255 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 PSMD8P48556 350 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms